| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0405 |
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| Symbol | rpsD |
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| ID | 4670802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 411886 |
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| End bp | 412509 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639837535 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_984733 |
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| Protein GI | 121592837 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.916178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCACGTT ATCTCGGCCC CAAGGCCAAA CTCTCCCGCC GCGAAGGCAC CGACCTGTTC
CTGAAGAGCG CACGCCGCTC TATCGCGGAC AAGGCCAAGT TTGATTCGAA GCCAGGCCAG
CATGGCCGTA CTTCTGGCGC ACGCACGTCA GACTATGGTC TGCAACTGCG CGAAAAGCAG
AAAGTCAAGC GCATGTATGG CGTGCTGGAA AAGCAATTCC GCCGCTATTT CGAGGCCGCT
GAACGCCTCA AGGGCAATAC AGGCGCTAAT TTGCTCGGCC TGCTCGAGTG CCGCCTGGAT
AACGTGGTGT ACCGCATGGG CTTCGGCTCG ACCCGTGCCG AAGCGCGCCA GCTCGTGTCC
CACAAGGCCA TCACGGTGAA TGGTCAAAGC GTCAACATCG CATCCTATCT GGTCAAGGCC
GGCGACGTGG TTGCGGTACG CGACAAATCC AAGAAGCAGG CACGTATTGT TGAAGCTTTG
CAATTGGCGC AGCAGGTGGG CATGCCCGTT TGGGTCGAAG TGAATGCCGA CAAGGTAGAA
GGTACCTTCA AGAAGGTCCC GGATCGCGAT GAGTTCGGTG CAGACATCAA CGAATCCCTG
ATCGTTGAGT TGTACTCGCG TTAA
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| Protein sequence | MARYLGPKAK LSRREGTDLF LKSARRSIAD KAKFDSKPGQ HGRTSGARTS DYGLQLREKQ
KVKRMYGVLE KQFRRYFEAA ERLKGNTGAN LLGLLECRLD NVVYRMGFGS TRAEARQLVS
HKAITVNGQS VNIASYLVKA GDVVAVRDKS KKQARIVEAL QLAQQVGMPV WVEVNADKVE
GTFKKVPDRD EFGADINESL IVELYSR
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