| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0401 |
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| Symbol | secY |
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| ID | 4670747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 409409 |
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| End bp | 410728 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639837531 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_984729 |
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| Protein GI | 121592833 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTACTA ACGCAGCTCA ACTGGCAAAA ACCGGTAAGT TTGGCGATCT CCGCCGGCGT
CTGGTCTTTC TGCTGCTCGC GTTGGTTGTG TACCGCATCG GCGCGCACAT TCCCGTTCCT
GGGATTGACC CGGCGCAGCT GCAGCAGTTG TTCAGTGGCC AGCAGGGCGG CATTCTCAAC
CTTTTCAATA TGTTTTCGGG TGGAGCGCTC TCGCGCTTCA CGGTCTTCGC GCTGGGGATC
ATGCCGTACA TCTCGGCATC GATCATCATG CAGCTGATGA CCTATGTGGT GCCCACATTC
GAGCAGTTGA AGAAGGAAGG GGAGGCCGGG CGCCGCAAGA TCACGCAGTA CACCCGTTAT
GGAACGTTGG GCTTGGCGAT TTTCCAATCG CTGGGTATTG CGGTGGCTCT GGAGAGCTCC
GCAGGTCTCG TGTTGAGTCC GGGCTTCGGC TTCCGGCTCA CGGCAGTGGT CAGCCTGACC
GCCGGCACGA TGTTCCTGAT GTGGCTGGGT GAACAGATCA CTGAGCGCGG CCTGGGCAAC
GGTATTTCGA TCCTGATCTT TGCCGGTATC GCCGCGGGTC TGCCCAGTTC TATCGGTGGT
CTGTTGGAGC TGGTGCGCAC GGGGGCGATG AGCATCCTGG CAGCCATCTT CATCGTGATC
GTCGTGGGAC TGGTGACGTA CTTCGTCGTC TTCGTCGAAC GTGGTCAGCG CAAGATACTG
GTGAACTATG CGCGGCGCCA GGTGGGCAAC AAGGTCTATG GTGGGCAATC CTCCCATCTG
CCTTTGAAGC TCAACATGGC GGGTGTGATT CCTCCAATCT TTGCGTCGTC CATCATCCTG
CTGCCTGCAA CCATTGTGAA TTGGTTCAGT GCGGGAGAGT CGATGCGGTG GTTGCGTGAT
ATTTCTGCGG CACTGACGCC CGGCCAGCCG GTCTATGTGA TGTTCTACGC CGCGGCGATC
ATCTTCTTCT GTTTCTTCTA CACGGCTCTG GTTTTCAACA GCCGCGAAAC GGCAGACAAC
CTGAAGAAGA GCGGAGCATT CATTCCAGGC ATCCGCCCGG GTGAACATAC CGCGCGCTAC
ATCGACAAGA TCCTGGTGCG GCTGACGCTG GCCGGGGCTG TTTACATCAC ATTCGTGTGT
TTGCTGCCCG AGTTCCTGAT CCTGAAGTAC AACGTGCCGT TCTATTTTGG TGGTACGTCG
TTGCTGATCA TCGTTGTCGT GACGATGGAC TTCATGGCTC AGGTACAGAA CTACATGATG
TCGCAGCAGT ACGAGTCGCT GCTGAAGAAG GCTAACTTCA AGACGACATT AGGTACCTGA
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| Protein sequence | MATNAAQLAK TGKFGDLRRR LVFLLLALVV YRIGAHIPVP GIDPAQLQQL FSGQQGGILN
LFNMFSGGAL SRFTVFALGI MPYISASIIM QLMTYVVPTF EQLKKEGEAG RRKITQYTRY
GTLGLAIFQS LGIAVALESS AGLVLSPGFG FRLTAVVSLT AGTMFLMWLG EQITERGLGN
GISILIFAGI AAGLPSSIGG LLELVRTGAM SILAAIFIVI VVGLVTYFVV FVERGQRKIL
VNYARRQVGN KVYGGQSSHL PLKLNMAGVI PPIFASSIIL LPATIVNWFS AGESMRWLRD
ISAALTPGQP VYVMFYAAAI IFFCFFYTAL VFNSRETADN LKKSGAFIPG IRPGEHTARY
IDKILVRLTL AGAVYITFVC LLPEFLILKY NVPFYFGGTS LLIIVVVTMD FMAQVQNYMM
SQQYESLLKK ANFKTTLGT
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