Gene Ajs_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0399 
SymbolrpmD 
ID4670719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp408761 
End bp408943 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content52% 
IMG OID639837529 
Product50S ribosomal protein L30 
Protein accessionYP_984727 
Protein GI121592831 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.894889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGC AACAAACCAT CAAGATTCAA CTGGTGCGCA GCCCGATTGG CACCAAAGAA 
TCGCACCGCG CTACCGTTCG TGGCCTGGGT CTTCGCAAGC TCAACAGCAT CAACGAACTC
AAGGACACGC CTGAAGTGCG CGGCATGATT AACAAGATCA GCTATCTGGT CAAAGTCCTC
TGA
 
Protein sequence
MTTQQTIKIQ LVRSPIGTKE SHRATVRGLG LRKLNSINEL KDTPEVRGMI NKISYLVKVL