| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0396 |
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| Symbol | rplF |
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| ID | 4670675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 407297 |
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| End bp | 407830 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639837526 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_984724 |
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| Protein GI | 121592828 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0491976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTG TAGGTAAATC CCCGGTAAGC ATCCCCGCAG GCGTGGATGT GTCCATCAAG
GACGACCAGA TCAGTGTCAA GGGTGCTGGT GGCGTGCTGT CGCTGGCGCA GAACGCGCTG
GTGAAGGTGT CTAACAACGA AGGCAAGCTG AGCTTTGAGC CGGTCAACGA CTCGCGTGAA
GCCAATGCCA TGAGCGGCAC CGTGCGCCAG TTGGTGAACA ACATGGTGGT CGGTGTGAGC
AAGGGCTTTG AGAAGAAGTT GACGCTGATT GGCGTGGGCT TCAAGGCAGC AGCCTCCGGC
AACAAGCTGA ACCTGGCCAT CGGTTTTTCG CATCCCGTGA ACTTCGAGAT GCCTACCGGC
ATCACCGTTG CCACGCCGAC GCCCACCGAA ATCGTGATCA AGGGTGCTGA CCGCCAAGTG
GTGGGCCAGC TGGCCGCCGA GATCCGTGCC GTTCGTCCGC CCGAGCCCTA TAAGGGCAAG
GGTATCCGCT ACGCGGACGA AAAAGTCACG ATCAAAGAGA CCAAGAAGAA GTAA
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| Protein sequence | MSRVGKSPVS IPAGVDVSIK DDQISVKGAG GVLSLAQNAL VKVSNNEGKL SFEPVNDSRE
ANAMSGTVRQ LVNNMVVGVS KGFEKKLTLI GVGFKAAASG NKLNLAIGFS HPVNFEMPTG
ITVATPTPTE IVIKGADRQV VGQLAAEIRA VRPPEPYKGK GIRYADEKVT IKETKKK
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