| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0389 |
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| Symbol | |
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| ID | 4671282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 401667 |
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| End bp | 403400 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639837519 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_984717 |
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| Protein GI | 121592821 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.83487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGC AGTTCAAGGC GATCGCGTTC GCCGCCGCGG CGCTGGCGCT GGGGCAGGCA
GCCTGGGCCG GCGAGGCCGA GGCCAAGAAG TGGATCGACA GCGAGTTCCA GCCCTCCACG
CTGAGCAAAG ACCAGCAGAT GGCCGAGATG AAGTGGTTCA TCGACGCGGC CAAGAAGCTG
CAGGCCAAGG GCGTGAAGGA GATCGCGGTG GTCTCCGAGA CCATCACCAC GCACGAGTAC
GAATCCAAGA CCCTGGCCAA GGCGTTCAGC GAGATCACGG GCATCCAGGT CAAGCACGAC
CTGATCCAAG AGGGCGACGT GGTCGAGAAG CTGCAGACCT CCATGCAGTC GGGCAAGTCC
ATCTATGACG GCTGGATCAG CGACTCCGAC CTCATCGGCA CCCACTACCG CTACGGCAAG
ATCCTGAACC TGTCCGACTA CATGGCCGGA CCGGGCAAGG ACTACACCAA CCCCGGCCTG
GACCTGCAGG ACTTCATCGG CACCAAGTTC ACCACCGCCC CGGACGGCAA GCTGTACCAG
CTGCCCGACC AGCAGTTCGC CAACCTGTAC TGGTTCCGCG CCGACCTGTT CGACCGCAAG
GACTTGAAGG ACAAGTTCAA GGCCAAGTAC GGCTACGACC TGGGCGTGCC GCTGAACTGG
AGCGCCTATG AGGACATCGC CGAGTTCTTC ACCAACGACG TGAAGAACAT CGACGGCAAG
CCGATCTACG GCCACATGGA CTACGGCAAG AAGGACCCGT CGCTGGGCTG GCGCTTCACC
GACGCCTGGC TGTCCATGGC CGGCAGCGCC GACATCGGCA CGCCCAACGG CCTGCCCATC
GACGAATGGG GCATCCGCGT GGCCGACGAC AAGTGCACCC CCGTGGGCGC CAGCGTGGCC
CGTGGCGGCG CCACCAACTC GCCGGCCGCC GTCTACGCGC TCACCAAGTA CGTGGACTGG
ATGAAGAAGT ACGCGCCCAA GGAAGCCATG GGCATGACCT TCGGTGAGGC CGGCCCCGTG
CCCGCCCAGG GCCAGATCGC GCAGCAGATC TTCTGGTACA CCGCCTTCAC CGCCGACATG
ACCAAACCCG GCCTGCCCGT GGTGAATGCC GACGGCACGC CCAAGTGGCG CATGGCCCCC
GGCCCCAACG GCCCGTACTG GAAGCAGGGC ATGCAGAACG GCTACCAGGA CGTGGGCAGC
TGGACCTTCT TCAAGGACCA CAACCCCGAC CGCCTGGCCG CCGCGTGGCT CTACGCCCAG
TTCGTGACGG CCAAGACCAC GTCGCTGAAG AAGACCGTCG TCGGCCTGAC GCCGATCCGC
GAGTCCGACA TCCGCTCCAA GGCCATGACC GACATGGCGC CCAAGCTGGG CGGCCTGGTC
GAGTTCTACC GCAGCCCTGC GCGCGTGGCC TGGTCTCCCA CCGGCACCAA CGTGCCCGAC
TACCCCAAGC TGGCGCAGCT GTGGTGGAAG AACGTGGCCC AGGCCGTCAC GGGCGAGAAG
ACCCCGCAGG CCGCCATGGA CACACTGGCC GACGAGATGG ACCAGGTGAT GGCCCGCCTG
CAGCGCGCCG GCATGGAGCG CTGCGCGCCC AAGCTGAACG CCAAGGGTGA CCCGGCCAAG
TGGCTGAGCG ACCAGCACGC GCCCTGGAAG AAGCTCGCCA ATGAGAAGCC CAAGGGCGAA
ACCATCAACT ACAACACCCT GCTGCAGGCC TGGAAGGACG GCAAGGTGCG TTGA
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| Protein sequence | MKMQFKAIAF AAAALALGQA AWAGEAEAKK WIDSEFQPST LSKDQQMAEM KWFIDAAKKL
QAKGVKEIAV VSETITTHEY ESKTLAKAFS EITGIQVKHD LIQEGDVVEK LQTSMQSGKS
IYDGWISDSD LIGTHYRYGK ILNLSDYMAG PGKDYTNPGL DLQDFIGTKF TTAPDGKLYQ
LPDQQFANLY WFRADLFDRK DLKDKFKAKY GYDLGVPLNW SAYEDIAEFF TNDVKNIDGK
PIYGHMDYGK KDPSLGWRFT DAWLSMAGSA DIGTPNGLPI DEWGIRVADD KCTPVGASVA
RGGATNSPAA VYALTKYVDW MKKYAPKEAM GMTFGEAGPV PAQGQIAQQI FWYTAFTADM
TKPGLPVVNA DGTPKWRMAP GPNGPYWKQG MQNGYQDVGS WTFFKDHNPD RLAAAWLYAQ
FVTAKTTSLK KTVVGLTPIR ESDIRSKAMT DMAPKLGGLV EFYRSPARVA WSPTGTNVPD
YPKLAQLWWK NVAQAVTGEK TPQAAMDTLA DEMDQVMARL QRAGMERCAP KLNAKGDPAK
WLSDQHAPWK KLANEKPKGE TINYNTLLQA WKDGKVR
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