| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0323 |
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| Symbol | |
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| ID | 4673660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 331633 |
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| End bp | 332934 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639837453 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_984652 |
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| Protein GI | 121592756 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.827014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTCC TGAACCACGC GATGGCGCCG ACTATCCGCC AGGCCCAGCG TACCCCGGCA
ATCGTTTCTT CCCTGGCCCT GGCAGGGGTT CTCACCCTCA GCGCCTGCGG CCAGAAAAAT
GATGCCGGCG GCGCCCCTGC CCAGCCGCCC ACCCCCGAGG TGGGCGTGGT CGCGGTGCAG
GCCAGCAGCA TCGGCCTGGT CACCGAGCTG CCCGGCCGGC TGGAGGCTTC GCGCGTGGCG
CAAGTGCGCG CGCGGGCCGC GGGCATTCTG CAAAAACGTG TTTTCACCGA AGGCAGTGAC
GTGAAGGCAG GCCAGGTGCT GTTCCAGATC GACAGCGCTC CCTACCAGGC CAGCCTGGCG
CAGGCCGAGG CCAGCGTGGC GCAGGCCGAG GCCAGCCTGG CGCAAAACCG TGCGCTGGCC
GAGCGCTACC GCCCGCTGGT CGGGGTGAAC GCCATCAGCA AGCAGGAATA CGACAACGCG
GTGGCAGGCC AGAAAACCTC CGAGGCCAAT GTGGCCGCCG CCAAGGCCGC CGTGACCACG
GCCCGCATCA ACCTGGGCTA TGCCACGGTC ACGGCGCCGA TTTCCGGGCG CATCGGCCGG
GCGCTGGTCA CAGAAGGCGC CCTGGTCGGC CAGGGCACGC CGACCGAGCT GGCGGTCATC
CAGCAGATCG ACCCGCTGTA CATCAACTTC ACGCAGTCGG CCTCTGACGC GCTCAAGCTG
CGCGCCGCCA TGACCAGCGG CAAATACAAA CAGGCCGACG CCAAGGCGGC GGCGGTGCGC
GTGGTGCTGG AAGACGGCAG CGTGTATCCG CAGGTGGGCC GGCTGTTGTT CACCGACCTC
ACGGTGGACG CCACCAGCGG CCAGGTGACC ATGCGTGCCG AGGTTCCCAA CAGCGACCGC
TCGCTGCTTC CCGGCCTGTA TGTTCGCGTG CGGCTGGAGC AGGCGCAGGT GGACAACGGC
ATCTTGCTGC CCCAGCAGGC GGTCACCCGC TCGGGCAAGG CCGACACGGT GCTGGTGGTG
GGCCCGGACA ACCAAGTCAC CCCGCGTGTG GTCAAGCTGG GGCCTGCACA GGGCTCCCAT
TGGGTGGTGC TCGATGGCCT GAAGTCGGGC GAACAGGTCA TGGTGGATGG CTTCCAGAAG
CTGCCGCGCG GCAAGCCCGG CGATCCGATC GTCGTCAAGC CCGTCGCCTG GCAAGCCGCT
GGTGCCGCCC AACAGCCCGC CACAGCGCCC GCATCAGCAG CGCCCGCCAC CCCCGCCTCG
GCGGCCTCCA GTCAGCCGGC CCCTGCGGCG GCAAAGCAAT AA
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| Protein sequence | MPLLNHAMAP TIRQAQRTPA IVSSLALAGV LTLSACGQKN DAGGAPAQPP TPEVGVVAVQ
ASSIGLVTEL PGRLEASRVA QVRARAAGIL QKRVFTEGSD VKAGQVLFQI DSAPYQASLA
QAEASVAQAE ASLAQNRALA ERYRPLVGVN AISKQEYDNA VAGQKTSEAN VAAAKAAVTT
ARINLGYATV TAPISGRIGR ALVTEGALVG QGTPTELAVI QQIDPLYINF TQSASDALKL
RAAMTSGKYK QADAKAAAVR VVLEDGSVYP QVGRLLFTDL TVDATSGQVT MRAEVPNSDR
SLLPGLYVRV RLEQAQVDNG ILLPQQAVTR SGKADTVLVV GPDNQVTPRV VKLGPAQGSH
WVVLDGLKSG EQVMVDGFQK LPRGKPGDPI VVKPVAWQAA GAAQQPATAP ASAAPATPAS
AASSQPAPAA AKQ
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