Gene Ajs_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0296 
Symbol 
ID4673353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp303718 
End bp303987 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content61% 
IMG OID639837427 
Productphosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_984626 
Protein GI121592730 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000166635 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAAGA AGAACATCAC CATCAGCAAT AAGCTGGGCC TGCATGCCCG CGCCTCCGCC 
AAGCTCACCA AGATGGCGGG CAGTTTTCCC TGCGACGTCT GGATGCGCAA GGGAGAGCGC
CGCATCAATG CCAAGAGCAT CATGGGGGTG ATGATGCTGG CGGCGGGCAT GGGGTCCGAG
GTCGAGATCG AGACCGATGG CGCGCAGGAG CAGGAAGCCA TGGATGCGCT TGTCGCGCTC
ATCGATGGCA AGTTCGGCGA GGGCGAATAA
 
Protein sequence
MIKKNITISN KLGLHARASA KLTKMAGSFP CDVWMRKGER RINAKSIMGV MMLAAGMGSE 
VEIETDGAQE QEAMDALVAL IDGKFGEGE