| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0292 |
|---|
| Symbol | |
|---|
| ID | 4673852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 300749 |
|---|
| End bp | 301252 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639837423 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_984622 |
|---|
| Protein GI | 121592726 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0000102715 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCA AGAAATGGCT GGCGGCGGGC GCCCTGGTGG CGGGCGCTGC CGTGGGCGCC
GTGGTGGTGC TGGGCTCGGG CACGTCCCAG GCACCGCAGT CCACGTTCGT TCTGCTCGAC
GGTTCGCAGC AGACCACCGC CGACCTCAAG GGCAAGGTGG CGCTGGTGAA CTTCTGGGCC
ACCAGCTGCA CCACCTGCGT GGCGGAGATG CCCGAGATCG TCGCAACCTA CGACAAGTAC
AAAGGCCAGG GCTTCGAGAC GCTGGCCGTG GCCATGAGCT ACGACCCGCC GAGCTACGTG
GTCAACTTCA CCGAGACGCG CAAGCTGCCG TTCAAGGTGG CCATCGACAA CACCGGCGCC
GTGGCCAAGG CCTGGGGCGA CGTGAAGCTC ACCCCCACCA CGTACATCGT CAACAAGCGC
GGAGAGATCG TGAAGAGCTA CATCGGCGCA CCCGATTTCG AGGAGCTGCA CAAGCTCATC
GAACGCCTGC TGGCCGAAGC CTGA
|
|---|
| Protein sequence | MQIKKWLAAG ALVAGAAVGA VVVLGSGTSQ APQSTFVLLD GSQQTTADLK GKVALVNFWA
TSCTTCVAEM PEIVATYDKY KGQGFETLAV AMSYDPPSYV VNFTETRKLP FKVAIDNTGA
VAKAWGDVKL TPTTYIVNKR GEIVKSYIGA PDFEELHKLI ERLLAEA
|
|---|
| |