| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0279 |
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| Symbol | rplD |
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| ID | 4672896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 293841 |
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| End bp | 294461 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639837410 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_984609 |
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| Protein GI | 121592713 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000793566 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000000126953 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCTCG AACTCCTGAA TGAACAGGGC CAGGCGGCGT CCAAGGTGGA TGTGCCCGAG
ACCGTGTTCG ACCGTCAGTA CAACGAAGAC CTGATCCATC AGATCGTCGT CGCTTACCAG
GCCAACGCCC GTCAAGGCAC GCGCGCCCAG AAGGACCGCG AGCAGGTCAA GCACTCGACC
AAGAAGCCTT TCAAGCAAAA GGGTACTGGC AATGCACGTG CCGGTATGAC CTCCTCGCCT
CTGTGGCGTG GGGGCGGTCG CATCTTCCCG AACCTGCCTG AAGAAAACTT CTCGCAGAAG
ATCAACAAGA AGATGTACCG CGCTGGCATG GCTTCCATCC TGTCGCAGCT GGCCCGTGAA
GGCCGTCTGG CTGTGGTGGA CTCCCTGAAG CTTGATACGC CCAAGACCAA GGTCCTGGCC
GACAAGTTCA AGGCCATGAA CCTGCAATCG GTGATGGTGA TCGCCGATGA AGTGGACGAA
AACCTGTACC TGGCATCCCG CAATCTGAAG AACGTGTTCG TGACCGAGCC GCGTTATGCA
GATCCCGTGT CGCTGGTGCA CTACAAGAAA GTGCTCGTCA CCAAGGGCGC GATCGACAAA
CTCAAGGAGA TGTTCGCATG A
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| Protein sequence | MQLELLNEQG QAASKVDVPE TVFDRQYNED LIHQIVVAYQ ANARQGTRAQ KDREQVKHST
KKPFKQKGTG NARAGMTSSP LWRGGGRIFP NLPEENFSQK INKKMYRAGM ASILSQLARE
GRLAVVDSLK LDTPKTKVLA DKFKAMNLQS VMVIADEVDE NLYLASRNLK NVFVTEPRYA
DPVSLVHYKK VLVTKGAIDK LKEMFA
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