| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0277 |
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| Symbol | rpsJ |
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| ID | 4672870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 292605 |
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| End bp | 292916 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639837408 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_984607 |
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| Protein GI | 121592711 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000127009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000000926134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTCCAAGC AAAAGATCCG CATCCGCCTG AAGGCATTCG ACTACAAGCT GATCGATCAG
TCTGCAGCCG AGATCGTTGA CACCGCCAAG CGTACCGGCG CCATCGTCAA GGGCCCCGTG
CCCCTGCCGA CGCGCATGAA GCGCTTCGAC ATCCTGCGTT CGCCGCACGT CAACAAGACC
AGCCGCGACC AGTTCGAAAT CCGCACGCAC CAGCGCCTGA TGGACATCGT CGATCCCACG
GACAAGACGG TGGACGCCCT GATGAAGCTG GACTTGCCGG CTGGCGTGGA CGTCGAAATC
AAGCTCCAGT AA
|
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| Protein sequence | MSKQKIRIRL KAFDYKLIDQ SAAEIVDTAK RTGAIVKGPV PLPTRMKRFD ILRSPHVNKT
SRDQFEIRTH QRLMDIVDPT DKTVDALMKL DLPAGVDVEI KLQ
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