| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0233 |
|---|
| Symbol | |
|---|
| ID | 4672106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 248739 |
|---|
| End bp | 249542 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639837364 |
|---|
| Product | exodeoxyribonuclease III Xth |
|---|
| Protein accession | YP_984563 |
|---|
| Protein GI | 121592667 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTCAAAT TAACCAGTCT CAACCTCAAC GGCATCCGCT CGGCCACGTC CAAAGGGGTC
GAGGCATGGA TTGCCCAAAG CCGGCCGGAT TGTATTTGCG TACAGGAAAT CAAGGCCCAG
TCTGCGGACA TGCAGGGGCG TTTCGAGGAG CTGGCCGGCC TGAAGGGCTA CTTCCATTTT
GCGGTGAAGA AGGGCTACTC CGGCGTGGGC ATCTATGCGC GCCACGAGCC CAGCGACGTG
GTCATCGGCT ACGGCTCCAG CGAGTTCGAC ACCGAGGGGC GCTACGTGGA ACTGCGCTTT
GACACGCCCG CGCGGCGCCT GTCCATCATC AGCGCCTACT TCCCCAGCGG CTCCTCGGGC
GAGGAGCGCC AGTTGGCCAA GTTCCGCTTC CTGGAGGAAT TCCATCCGCA CCTCATGCGG
CTGAAGGCCG AGCGGGAGTT CATCCTGTGC GGCGACATCA ACATTGCCCA CCAGCAGATC
GACCTGAAGA ACTGGCGCAG CAACCAGAAG AACAGCGGCT TTTTACCCGA GGAGCGCGCC
TGGATGACAA AGTTGTTGCA CATCTCTGAC CCCGCGGGCG GGCTGGTGGA CGTTTACCGT
CAGTTACAGC CGGAGACCAC GGACGCTTGC TACACGTGGT GGAGCAACCG TGGCCAGGCC
TATGCCAACA ACGTGGGGTG GCGCCTGGAC TACCACCTGG CGACGCCCGC CATCGCGGCG
CTCGCGCGTA CCGAGGAAAT CTACAAGGCG CAGAAGTTCA GCGACCACGC GCCCATCACC
GTGGGGTACG AGCTGTCGCT CTGA
|
|---|
| Protein sequence | MFKLTSLNLN GIRSATSKGV EAWIAQSRPD CICVQEIKAQ SADMQGRFEE LAGLKGYFHF
AVKKGYSGVG IYARHEPSDV VIGYGSSEFD TEGRYVELRF DTPARRLSII SAYFPSGSSG
EERQLAKFRF LEEFHPHLMR LKAEREFILC GDINIAHQQI DLKNWRSNQK NSGFLPEERA
WMTKLLHISD PAGGLVDVYR QLQPETTDAC YTWWSNRGQA YANNVGWRLD YHLATPAIAA
LARTEEIYKA QKFSDHAPIT VGYELSL
|
|---|
| |