Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0199 |
Symbol | |
ID | 4671556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 218549 |
End bp | 219892 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639837331 |
Product | major facilitator superfamily transporter |
Protein accession | YP_984530 |
Protein GI | 121592634 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00901] AmpG-related permease |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.723346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCTG ACGCCCCCGC ATCCGCCGCC GCCCGCCGCT CCTGGCGCCA GGCCTGGCTC GTCTACCTAG AGCCCGCGAG CCTGCGCATG CTGGCCCTGG GCTTTGCAGC CGGGCTGCCG CTGCTGCTGG TACTGGGCAC GCTGTCTTTC AGGCTGCGCG AGGCGGGCAT CGACCGCACC ACCATCGGCT ATCTGTCGTG GGTGGGGCTG GCCTATGCGT TCAAGTGGGT CTGGTCGCCG CTGGTGGACC GCCTGCCGCT GCCACTGCTC ACGCGCTGGC TGGGGCGCCG GCGCAGCTGG CTGCTGCTGG CGCAGGCGCT GGTGATGGCC GGGCTGGTGG GCATGGCGCT GGCCGACCCG CGCGACGCGC TGGGGCCCAT GGTGTGGTGC GCGCTGCTGG TGGCCTTCGG CTCGGCCACG CAGGACATCG CGCTGGATGC CTTCCGCATC GAATCTGCCG ACGCCGACCA CCAGGCCGCC CTGGCCGCCA CCTACCAGAC GGGCTACCGC CTGGCCATGA TCTGGGCCGG CGCGGGCGTG CTGTGGGTGG CCGCGCGTGC CGAGGTGGCG GGATTGGCCG GCTACCAGGC CAGCGCCTGG GCCACGGCCT ATCTGGTGAT GGCGGCGTCG ATGCTGGTGG GCACGGTGAC GGTGCTGCTG TCACCCGAGC CCCAATCCGA TGCCGCGCGC CCGCTGGCGC CCGCGCGCAA CCTGGGCGAA TGGCTGCGCG GCGCGGTGGT GGCGCCGTTT GCCGACTTCA TCCGCCGCTA CCGCTGGCAG GCGGCGCTGA TTCTGGCGCT GATTGCCGTC TATCGCATCA GCGACGTGGT AATGGGCATC ATGGCCAACC CGTTCTACGT GGACATGGGC TACACCAAGG ACGAGGTGGC CGCCGTGAGC AAGGTCTTCG GCGTCATCAT GACGCTGGCG GGTGCCTTTG TGGGCGGCGT GCTGTCCATG CGCCTGGGCG TCATGCGCGT GCTGATGCTA GGAGCCGTGC TCAGCGCGCT GACCAACCTG CTGTTTGCCT GGCTGTCCGG GCATGGCCAC GACCTGACCG CGCTGGTGGC CGTGGTCAGC GCCGACAACC TGGCCGGCGG CATCGCATCG GCCGCGTTCA TCGCCTACCT GTCCAGCCTG ACCAACGTGC AGTACTCGGC CACGCAGTAC GCGCTGTTCA GCTCCATGAT GCTGCTGGCC CCCAAATGGC TGGCGGGCTT CTCGGGCCAG TTCGTCGATG CCTACGGCTA CAGCGCGTTC TTTACCAGCA CGGCCCTGCT GGGCCTGCCG GTGCTGCTGC TGGTGGCGCT GGCGCACAGG GCCAAAAAGG CTTCCAGCGC TTGA
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Protein sequence | MPPDAPASAA ARRSWRQAWL VYLEPASLRM LALGFAAGLP LLLVLGTLSF RLREAGIDRT TIGYLSWVGL AYAFKWVWSP LVDRLPLPLL TRWLGRRRSW LLLAQALVMA GLVGMALADP RDALGPMVWC ALLVAFGSAT QDIALDAFRI ESADADHQAA LAATYQTGYR LAMIWAGAGV LWVAARAEVA GLAGYQASAW ATAYLVMAAS MLVGTVTVLL SPEPQSDAAR PLAPARNLGE WLRGAVVAPF ADFIRRYRWQ AALILALIAV YRISDVVMGI MANPFYVDMG YTKDEVAAVS KVFGVIMTLA GAFVGGVLSM RLGVMRVLML GAVLSALTNL LFAWLSGHGH DLTALVAVVS ADNLAGGIAS AAFIAYLSSL TNVQYSATQY ALFSSMMLLA PKWLAGFSGQ FVDAYGYSAF FTSTALLGLP VLLLVALAHR AKKASSA
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