Gene Ajs_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0162 
Symbol 
ID4670658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp182604 
End bp183335 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID639837294 
Producthypothetical protein 
Protein accessionYP_984493 
Protein GI121592597 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.844011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCT TTTCCCTCAA GACCCTGACC CTCGCTTTTG CGGCCGTCGC CGCACCGGGC 
CTTGCCAGCG CCCAGCTCAC TGCCAATGTG TCGCTGACCA GCAACTACAA GTTCCGCGGC
CAGGACCAGG ACGTGAACCG CATCAAGGCC GTGAACCCGG CCATCCAGGG CGGGTTCGAC
TACAGCTTTG GCGACAGCGG CTTCTATGTG GGTAACTGGA ACTCCAGCGT GGACTGGCTG
TCCGGCAACT CCATCGAGGC CGACTTCTAC GGCGGCTACA AGTTCAAGGC CGGCGAGGTG
GACCTGGATG TGGGCGCGCT CACGTATGTG TACCCGGGCA ACACCAGCGG CAACACCACC
GAGCTGTACG GCGCGGCCAC GTACGGCCCG TTCACGGCCA AGTACTCGCA CACCGTGTCC
AAGGATTACT TCGGCTGGGC GGGCGCCAAG ACCTCCAGCA ACCGCGGGCG CAACACGGGC
TACCTGAACC TGGCGTTTGC GCAGGAGGTT GCGCCCAGCG TCACGCTGAA GGCGTCCGTG
GGCTACACGC GCTTTGCCAG CGACATCAAG GATCTGGGCG TGCCCAATTA CGTGGACTAC
AGCGTGGGCG GCGCCTACGA CTTCGGCGCC GGCCTGTCGT TGTCCGCGGC GGTTGCTGGA
GCCAACAAGA AGGGCTTCTT CGGCGATGCC AACAAGGCCC GCCTGATCGT CTCCCTCACC
AAGACCCTTT AA
 
Protein sequence
MHRFSLKTLT LAFAAVAAPG LASAQLTANV SLTSNYKFRG QDQDVNRIKA VNPAIQGGFD 
YSFGDSGFYV GNWNSSVDWL SGNSIEADFY GGYKFKAGEV DLDVGALTYV YPGNTSGNTT
ELYGAATYGP FTAKYSHTVS KDYFGWAGAK TSSNRGRNTG YLNLAFAQEV APSVTLKASV
GYTRFASDIK DLGVPNYVDY SVGGAYDFGA GLSLSAAVAG ANKKGFFGDA NKARLIVSLT
KTL