Gene Ajs_0150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0150 
SymbolaroK 
ID4672684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp168554 
End bp169090 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content70% 
IMG OID639837282 
Productshikimate kinase 
Protein accessionYP_984481 
Protein GI121592585 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.999623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGC GTTGCGCCCT GGTCGGCATG CCGGGCTCGG GCAAATCCAC GGTGGGCCGC 
CAGCTCGCCC GCCGTCTGGG GCTTCCCTTC GTGGACCTGG ACCAGCGGCT GGAGCAGTGG
CTGGGCACCA GCATCCGCGA CTATTTCGAC CAGCATGGCG AAGCGGCCTT TCGCGACCAC
GAGGCTGCGC TGCTGGCCGA GCTGGCCGCC CAGCCCGGCG GCATGGTGCT GTCCACCGGC
GGCGGCGCCG TGCTGCGCGA GGACAACCGC GCCACGCTGC GCCGCAGCTT TCCCCATGTG
ATGTACCTGC GCGCTTCGCC CGACGAGATC TTCAAGCGCA TCAAGCACGA CCGCACGCGT
CCCCTGCTGC AGGTGGACGA CCCGCTGGCC CGCCTGCGCG ACCTCTACCG TGCGCGGGAC
CCGCTGTACC GCGAGGCCGC GCACTACGTC ATCGAGACCG GCCGGCCCAC GGTGCACACG
CTGGTCAACA TAATCATGAT GCAGCTGGAG ATGGCGGCGC CGGGCGACCC GGTGTAG
 
Protein sequence
MQTRCALVGM PGSGKSTVGR QLARRLGLPF VDLDQRLEQW LGTSIRDYFD QHGEAAFRDH 
EAALLAELAA QPGGMVLSTG GGAVLREDNR ATLRRSFPHV MYLRASPDEI FKRIKHDRTR
PLLQVDDPLA RLRDLYRARD PLYREAAHYV IETGRPTVHT LVNIIMMQLE MAAPGDPV