Gene Ajs_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0127 
Symbol 
ID4672670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp142859 
End bp143836 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content70% 
IMG OID639837259 
Producthypothetical protein 
Protein accessionYP_984458 
Protein GI121592562 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCCA CCCCCTCCCG CCGCAGCTTC ATCGCCGGCA GCCTGCTTGC CGCCGCCCAT 
CCGCTGGCGG CGCTCGCGGC CGACCCCTGG CCCAGCAAGC CCGTGCGCTT CATCGTGCCG
TTCCCGCCCG GCGGCCCGGT GGACACCACC GCCCGCGTCT TCAGCCACAG GCTGTCCGAG
ATCTGGAAGA CGCCCACCGT CATCGACAAC CGCGCCGGCG CGGGCGGCGT GGTGGGCGCC
ACGGCCGCCG CCAAGGAGGC ACCCGACGGT TACGGCCTCT TCGTGGGTGC CATCCACCAC
TCGGTCAACC CCTCGTTGAT GGGCAAGCTG CCCTACGACA TCGAGAAGGA CTTCGCGCCC
ATCAGCTTCG CGGCCATGTT CCCCGTGTTC ATCGTGGCGC ACCCCTCGGT GCCGGCCAAC
ACCATCCAGG AGCTGATCGC GCTGGCCAAG AAGGGCACGC CGCTGGCCTA TGGCTCGTCG
GGCAACGGGG GCGGCACGCA CCTGGCGGGC GAGCTGTTCA ACATGGAGGC GGGGACCAAG
CTGCAGCACA TTCCCTACAA GGGCAGCGCC CCCGCGATGA ACGACCTGCT GGGCGGCCAG
GTGCAGCTCA TGTTCAGCGA CGCACCCACG GCGCTGCAGC ACATCAAGAG CGGCCGTGTG
AAGGTGCTGG GCGTGGCCAG CCGCCAGCGC TCGGCCATGC TGCCCGACGT GCCCACGGGC
GTGGAATCGG GCCTGCCGGG CTATGAGGCG TATTCGTGGG CCGCGCTGTT CGCGCCCGCC
AAGACGCCCC AGGCCGTGCT GGACAAGATC AACGCCGACT TCAACACTGC GATGAAAGAC
CCCGCCGTGC GCCAGCGCCT GCTGGACGCC GGCGCCGAGG CCGATCCCGG CACGCAGGAG
CAGATGCGCC AGCGCCTGCG CGGCGAGCTG GACAAATGGG CCAAGGTCAT CAAGACGGCG
GGGATCACGC CGGGTTGA
 
Protein sequence
MHSTPSRRSF IAGSLLAAAH PLAALAADPW PSKPVRFIVP FPPGGPVDTT ARVFSHRLSE 
IWKTPTVIDN RAGAGGVVGA TAAAKEAPDG YGLFVGAIHH SVNPSLMGKL PYDIEKDFAP
ISFAAMFPVF IVAHPSVPAN TIQELIALAK KGTPLAYGSS GNGGGTHLAG ELFNMEAGTK
LQHIPYKGSA PAMNDLLGGQ VQLMFSDAPT ALQHIKSGRV KVLGVASRQR SAMLPDVPTG
VESGLPGYEA YSWAALFAPA KTPQAVLDKI NADFNTAMKD PAVRQRLLDA GAEADPGTQE
QMRQRLRGEL DKWAKVIKTA GITPG