Gene Ajs_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0098 
Symbol 
ID4672205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp109495 
End bp111063 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content70% 
IMG OID639837230 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_984429 
Protein GI121592533 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.690806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.913632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCAG ACATCGAACA CCTGCTGGCC CAGCCCTTCG GCTCGCTGCC CGAACTGATT 
GAACGCCAGG CCGCGCACCG CCCTGGACAC ACCGCCCTGG TCCTGGAGGG CCAGCGGCTG
GACTACGCCG CGCTGCACGC CGGCATGGAC CGCGTGGCGC GCAGCCTGCA GCGTGACGGC
ATGCAACCCG GCGATGTGGT GGCCATCTGC GCAGGCACCT CGGTCGAATA TGTGCTGGCC
TACCTGGGCG CTCTGCGCGC CGGCGTGGCC GTGGCGCCGC TGGCGCCCTC GGCCACGGCC
GAGCACCTGA GCGCCATGCT GGACAACTGC GGCGCGCGCC TGGTGCTGCG CGACCGCGAG
GTGGCCGCGC AATGGCCGCT GCATGCGGGC GCTGCGCTGC GTTGCGTGGC CCTGGACGAT
GCGCCCGAAG CGGGCGAGCC CTGGTCGCAA TGGCTGGTCC AGGGCGACGG CGCACCGGCA
CCGATCACGC CCGCGCCCGA CTGGCCGTTC AACGTGATCT ATTCCTCGGG CACCACGGGC
GTGCCCAAGG GCATCGTGCA GTCCTGGGCC ATGCGCTGGG CGCATGTGCG GCGCGCAGTC
ACCAACGGCT ACGGGCCGGA TGCCGTCTCG CTGTGCGCCA CGCCGCTGTA TTCCAACACC
ACGCTGGTGG CGGCGCTGCC CACGCTGGCG CTGGGCGGCA CGCTGGTGCT GATGCGCAAG
TTCGATGCCA CGCGCTATCT TGCGCTGGCC CAGCAGCACG GCGCCACCCA CACCATGCTG
GTGCCCGTGC AGTACCAGCG CCTGATGGCC TGCCCGGATT TCGACCGCAC GGACTTGAGC
CGGCTGCAAC ACAAGTTCTG TACCAGCGCG CCCTTCAGTG CCGCGCTCAA GGCCGAGGTG
CTGCGGCGCT GGCCGGGCCG GCTCATCGAG TACTACGGCA TGACCGAAGG CGGCGTGCGC
TGCGAGCTGC ACTGCCATGA CTTTCCGCAC AAGCTGCACA CCGTGGGCCG CCCGGGCGAG
GGCGCCGACA TCCGGTTCAT CGACGAGCAG GGGCGCGAAC TGCCTGCGGG CGAGCAGGGC
GAGATCGTCG GCCGCTCGGC TGGGATGATG AGCGGCTACT ACCGCCTGCC GGACAAGACG
CGCGAGGCCG AGTGGTTCGA TGCGGAAGGC CGGCGCTACA TCCGCAGCGG CGACGTGGGC
CGGCTGGACG CGGACGGCTT CATCGTGCTG GGCGACCGCA AGAAGGACAT GATCATCACG
GGCGGCTTCA ACGTCTACCC GAGCGACGTC GAGGCTGTGC TGTGCCAGCA CCCGCAGGTG
GCCGAGTGCG CCGTGGTCGG CGTGCCCTCC GAGCAGTGGG GCGAGACACC CGTGGCCTAT
GTGGTGGGGC GCTCGGGCTC ACAGCCCACC GCAGAAGAAT TGCGCGAATG GCTCAACACC
CGCGTGGGCA AGACCCAGCG CGTGGCCGAC CTGCGGCTGG TCGAACGCCT GCCGCGCAGC
GAGATCGGCA AGGTGCTCAA GCGCACGCTG CGCGAGCAGT ACCTGCAAGC GGAGCCCATC
GCCGGCTGA
 
Protein sequence
MHPDIEHLLA QPFGSLPELI ERQAAHRPGH TALVLEGQRL DYAALHAGMD RVARSLQRDG 
MQPGDVVAIC AGTSVEYVLA YLGALRAGVA VAPLAPSATA EHLSAMLDNC GARLVLRDRE
VAAQWPLHAG AALRCVALDD APEAGEPWSQ WLVQGDGAPA PITPAPDWPF NVIYSSGTTG
VPKGIVQSWA MRWAHVRRAV TNGYGPDAVS LCATPLYSNT TLVAALPTLA LGGTLVLMRK
FDATRYLALA QQHGATHTML VPVQYQRLMA CPDFDRTDLS RLQHKFCTSA PFSAALKAEV
LRRWPGRLIE YYGMTEGGVR CELHCHDFPH KLHTVGRPGE GADIRFIDEQ GRELPAGEQG
EIVGRSAGMM SGYYRLPDKT REAEWFDAEG RRYIRSGDVG RLDADGFIVL GDRKKDMIIT
GGFNVYPSDV EAVLCQHPQV AECAVVGVPS EQWGETPVAY VVGRSGSQPT AEELREWLNT
RVGKTQRVAD LRLVERLPRS EIGKVLKRTL REQYLQAEPI AG