Gene Ajs_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0083 
Symbol 
ID4674343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp87355 
End bp88455 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content69% 
IMG OID639837215 
Productmethionine synthase (B12-dependent) 
Protein accessionYP_984414 
Protein GI121592518 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAAA GCCCGTTATT GTGCGCCCGC CACCGCGGGC GGCGCCGGCT TCCTACAATC 
GGCCCCATGA CCCTGCCCCA CTACACCCGC GCGCAAGCGC TGCCCGCCAT CCTGGAACAA
CGCATCGCCA TCCTCGACGG CGCCATGGGC ACGATGATCC AGCGCTTCAA GCTGACCGAG
GCGCAGTACC GGGGCGAGCG CTTCAAGGAC TTTGCGCGCG ACGTGAAGGG CAATAACGAG
CTGCTGAGCC TCACGCGCCC CGACGTGATC CGCGACATCC ATGAAGGGTA TCTCGCGGCC
GGCGCCGACC TGATCGAGAC CAACACCTTC GGCGCGACCT CGATCGCGCA GGACGACTAT
GGGCTAGCCG AGCTGGCCTA CGAGATGAAC CTGGAGAGCG CCAAGCTCGC GCGCGCGGCC
TGCGACAAAT TCAGCACGCC CGACAAGCCG CGCTTCGTCG CCGGCGCCCT CGGCCCCACG
CCCAAGACCG CCAGCATCAG CCCCGACGTG AACGACCCCG GCGCGCGCAA CGTCACCTTC
GAGCAACTGC GCGCGGCCTA CCACGAGCAG GCGCGCGGCC TGATCGAGGG CGGCGCCGAC
GTGCTGCTGG TCGAGACCAT CTTCGACACG CTGAACGCCA AGGCCGCGCT GTTCGCCATC
GACGAGGTGT TCGAGGAAAC CGGCGAGTGC CTGCCCATCA TGATCAGCGG CACGGTGACG
GATGCGTCCG GCCGCATCCT CTCGGGCCAG ACGGTGACCG CCTTCTGGCA CAGCGTGCGC
CACGCGCGGC CGCTGTCGGT GGGCCTGAAC TGCGCACTGG GCGCCACGCT GATGCGCCCC
TACATCCAGG AACTGGCCAA GGCCGCGCCG GACACCTTCA TCAGCTGCTA CCCCAACGCG
GGCCTGCCCA ACCCGATGAG CGACACGGGC TTCGACGAGA CGCCCGAGGT CACCAGCCGC
CTGGTGCACG AATTCGCCGC CGAGGGCCTG GTCAACATCG TGGGCGGCTG CTGCGGCACC
ACGCCGGACC ACATCGGCGC CATTGCGCGC GCCGTGGCGC CGGTGGGTAC GCGCCGGCTG
TTCCAGACCG AAGCCGCCTA G
 
Protein sequence
MAQSPLLCAR HRGRRRLPTI GPMTLPHYTR AQALPAILEQ RIAILDGAMG TMIQRFKLTE 
AQYRGERFKD FARDVKGNNE LLSLTRPDVI RDIHEGYLAA GADLIETNTF GATSIAQDDY
GLAELAYEMN LESAKLARAA CDKFSTPDKP RFVAGALGPT PKTASISPDV NDPGARNVTF
EQLRAAYHEQ ARGLIEGGAD VLLVETIFDT LNAKAALFAI DEVFEETGEC LPIMISGTVT
DASGRILSGQ TVTAFWHSVR HARPLSVGLN CALGATLMRP YIQELAKAAP DTFISCYPNA
GLPNPMSDTG FDETPEVTSR LVHEFAAEGL VNIVGGCCGT TPDHIGAIAR AVAPVGTRRL
FQTEAA