| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0057 |
|---|
| Symbol | |
|---|
| ID | 4671515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 62141 |
|---|
| End bp | 63388 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639837189 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_984388 |
|---|
| Protein GI | 121592492 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC CGGCTGCCCT GCAACCCGGC GCGCTGCAGC ACGTGAAGGT GCTGGACCTG
TCGCGCGTGC TGGCCGGCCC CTGGGCCGCC CAGACGCTGG GTGACCTGGG CGCCGAGGTC
ATCAAGGTGG AGCGCCCCGG CAGCGGCGAC GACACGCGCG CCTGGGGCCC GCCCTACGTG
ACCGACCCCG CCGGCCAGCC CACGGGCGAG TCGGCCTACT ACATGTGCAC CAATCGCAAC
AAGCAGTCGG TGACCATCGA CTTCATCCGC CCCGAGGGGC AGGAGCTGGT GCGGCGCCTG
GCGCAGCAGT GCGACGTGCT GGTGGAGAAC TTCAAGACAG GCGGTCTGGC GCAGTACGGG
CTGGACTATG CCTCGCTGAG CGCGCTCAAC CCGCGCCTGG TGTACTGCTC CATCACCGGC
TTCGGGCAGA GCGGGCCGTA TGCGCACCGC GCCGGCTACG ACTTCCTGAT CCAGGGCATG
GGCGGGCTGA TGAGCGTCAC CGGCCGCCCC GACGGCGAGG ACGGCGGCGG CCCGATGAAG
GTGGGCGTGG CGCTCACCAA CATCCTCACC GGCCTGTACG CCAGCACCGC CATCCTGGCC
GCGCTGCAGG CGCGCGAGCA CACCGGCCGC GGCCAGCACA TCGACCTGGC GCTGCTGGAC
GTGGGCGTGG CGTGCCTGGC CAACCAGGGC ATGAACTACC TGTACGGCGG CAAGGTGCCG
CAGCGCATGG GCAACGCCCA CCCCAACACC GTGCCCTACC AGGACTTCCC CACGGCCGAC
GGCCACATGA TCCTGGCCGT GGGCAACGAC GGGCAGTTCG CGCGCTTGTG CCACGCCGTG
GGCCAGCCCG GCTGGGCGCA GGATGCGCGC TTTGCCACCA ACGCCGCGCG TGTGGCGCAC
CGCGACGAAC TGGTGGCGCT GATCCGCGGC GTGACGGTGG GCAAGCCCAC GCGCGACTGG
ATCGCGCTGC TGGAGCAGCA CGCCGTGCCG TGCGGGCCCA TCAACACCGT GCGCGAGGTC
TTCGAAGATC CGCAGGTGCG CGCGCGTGGC TTGCAGATCC GCATGGAGCA TCCGCGCGCC
GGCGCCGTGC CGCTGGTGGC CAGCCCCATG CGCCTGTCGG ACACGCCGGT CACCTATCGC
CACACCCCGC CGCAGCTCGG CCAGCACACC GACACCGTGC TGCGCGAACA CTTGGGCCTG
GCGCCCGAGG CCATCGATGC GCTGCGCGCG CAGGGGGTGG TGGCATGA
|
|---|
| Protein sequence | MTQPAALQPG ALQHVKVLDL SRVLAGPWAA QTLGDLGAEV IKVERPGSGD DTRAWGPPYV
TDPAGQPTGE SAYYMCTNRN KQSVTIDFIR PEGQELVRRL AQQCDVLVEN FKTGGLAQYG
LDYASLSALN PRLVYCSITG FGQSGPYAHR AGYDFLIQGM GGLMSVTGRP DGEDGGGPMK
VGVALTNILT GLYASTAILA ALQAREHTGR GQHIDLALLD VGVACLANQG MNYLYGGKVP
QRMGNAHPNT VPYQDFPTAD GHMILAVGND GQFARLCHAV GQPGWAQDAR FATNAARVAH
RDELVALIRG VTVGKPTRDW IALLEQHAVP CGPINTVREV FEDPQVRARG LQIRMEHPRA
GAVPLVASPM RLSDTPVTYR HTPPQLGQHT DTVLREHLGL APEAIDALRA QGVVA
|
|---|
| |