| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0049 |
|---|
| Symbol | |
|---|
| ID | 4670560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 51534 |
|---|
| End bp | 52832 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639837182 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_984381 |
|---|
| Protein GI | 121592485 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.471283 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTGGC AGCAGCAACG TTTTTCGGCA CAAGGGCGCT GGCAGGCCAT TGCAGAGCAG
ACGGCCGTGG TCGAAGTGGA TGTCCAAGGC GCGGTGCGCG AAGTGAACGC GCGGTTTTGT
GACCTGCTGG GCTACCAGCG TGCGGAATTG ATCGGCCAGC CCCCAACGAT TTTCTATCCA
CCGGAATACG TTGCCAGCCC TGCCTTTCAG GCCAATTGGC GGCGCCTGTG CGGCGGCGAA
TTCGTGCAAG GCACGGCGCA GCGCCGCTGC AAAAACGGCA CCGTGGTCTG GGTGCAGGGC
ATGTTCTACC CCGTGCGCGA TGCCCGCGGC CGGGTGGAGC GCATCGTGGG GCTGGTTTAC
GACGTGACCG CCACGCAGGA GCAGACGCAG CGCGCCCATG CCATCCTGGA GGCCATCGAA
CGCTCCATGG CAGTGATCGA GTTCGACCTG CAAGGCCATG TGCTGCGCGC CAACGACCAC
TTTCTGCACA CCATGGGCTA CACCCGCCAG AACCTGGTGG GCCAGCACCA CCGCATCTTG
TGCCCGCCCG CGTTCGCGCA AAGCAGCGAC TACCCACGCT TTTGGGACGA TTTGCGCGCG
GGCGTGTATT CCAAGGGCAA GATCGAGCGC GTCGATGCGC GGGGGCGCAC GGTGTGGCTG
GAGGCGACGT ACAACCCGGT GCTCGACCCT GACGGCGTGG TGAGCCACAT CGTCAAGTTC
GCCACCGACA TCACCGCGCG TGTGCAGCAG GCGCAGGCGC GCGAGCAGGG CGTGAACACG
GCGTTTGCCG TGGCGCAGGA GACGCAGCAG CTCTCCGAAG AAGGCACGCA AACCATCGTC
GACGCCACGG CGCGCATCCA GTCGATCGCC CAGCTGTTCG AGGACACCGC GGCCCGCGTG
CACGAACTCG GGCGCAAGAC CGAGAGCATC GCCGCCAGCG TGCAGGGCAT ACGCCGCGTG
GCCGACCAGA CCAACCTGCT GGCCCTCAAC GCGGCGGTGG AGGCCGCGCG CGCCGGCGTG
GCCGGGCGCG GCTTTGCCGT GGTGGCCGAA GAGGTGCGCA AACTCGCCGG CGACAGCCGC
ACCGCCACCA ACGACATCCA CCAGACCATC CAGGCCGTGC TGCAGGAGAT GCGGGCGATG
ATCGACCACA TCCAGGGCGG CGTGGCGGCG GTGGAGCAGG GTGCCCAGCT GTCACGCCAG
GCGCGCGACG CCATCGAGCG CATCCGCGAG GACGCACACA AGGTGGTTGA CGTGGTGCAG
GAGCTGCACG CGCTTGAGAC CGGCAAGCCG GGGCGCTGA
|
|---|
| Protein sequence | MWWQQQRFSA QGRWQAIAEQ TAVVEVDVQG AVREVNARFC DLLGYQRAEL IGQPPTIFYP
PEYVASPAFQ ANWRRLCGGE FVQGTAQRRC KNGTVVWVQG MFYPVRDARG RVERIVGLVY
DVTATQEQTQ RAHAILEAIE RSMAVIEFDL QGHVLRANDH FLHTMGYTRQ NLVGQHHRIL
CPPAFAQSSD YPRFWDDLRA GVYSKGKIER VDARGRTVWL EATYNPVLDP DGVVSHIVKF
ATDITARVQQ AQAREQGVNT AFAVAQETQQ LSEEGTQTIV DATARIQSIA QLFEDTAARV
HELGRKTESI AASVQGIRRV ADQTNLLALN AAVEAARAGV AGRGFAVVAE EVRKLAGDSR
TATNDIHQTI QAVLQEMRAM IDHIQGGVAA VEQGAQLSRQ ARDAIERIRE DAHKVVDVVQ
ELHALETGKP GR
|
|---|
| |