| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0048 |
|---|
| Symbol | |
|---|
| ID | 4670699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 50045 |
|---|
| End bp | 51331 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639837181 |
|---|
| Product | uracil-xanthine permease |
|---|
| Protein accession | YP_984380 |
|---|
| Protein GI | 121592484 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.736072 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.463127 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTTT TGCAATGGAA TGAGCGCCCG GCGCAGGTGC TGCAGGGTGG CGGCGTGATC
GGACCGGATG AGCGGCTGCC CTGGGCGCAG ACCGGGCTGA TGGGCATCCA GCACGTCATC
GCCATGTTCG GCGCCACGGT GCTGGCGCCC ATCCTGATGG GGTTCGACCC CAACGTGGCG
GTGCTGATGA GCGGCATCGG CACGCTGATC TTCTTCCTCA TCACCGGTGG CAAGGTCCCG
AGCTACCTGG GCTCGTCGTT CGCCTTCATC GGCGTGGTGA TCGCGGCCAC GGCCTATGCA
GGCAAGGGCC CCAACGCCAA CATCGGCGTG GCGCTGGGCG GCATCATCGC CTGCGGCCTG
GTGTACACGC TGGTGGGCGT AGTGGTGCAC CTGGTGGGCA CGGGCTGGAT CGAGCGCTTC
ATGCCCCCGG TGGTCACCGG CGCGGTGGTG GCCGTGATCG GGCTGAACCT GGCCGGCATC
CCCATCAAGA ACATGGCGGC CAACAACTTC GAGGCCTGGA TGCAGGCCCT GACCTTCGTG
TGCGTGGCGC TGGTGGCGGT ATTCACCAGC GGCATGCTGC AGCGCCTGCT GATCCTGGTG
GGACTGATCA TCGCCAGCCT GCTGTACGCG CTGCTGACCA ACGGCATGGG CCTGGGCAAG
CCGATCGACG TATCGGGCAT CGCCAACGCC GCCTGGTTTG GCCTGCCGCA GTTCCACGCG
CCCGTGTTCA GCGCGCCCGC CATGCTGCTG ATCGTGCCGG TGGTCATCAT CCTGGTGGCC
GAGAACCTGG GCCACATCAA GGCCGTGACG GCCATGACCG GCAAGAACCT GGACCAGTAC
ATGGGCCGCG CCTTCATCGG CGACGGCGTG GCGACGATGG TGAGCGGCGC GGTCGGCGGC
ACGGGCGTGA CGACGTACGC CGAGAACATC GGCGTGATGG CCGCCACGCG CATCTACTCC
ACGGCGGTGT TCCTGGTCGC GGCGCTGCTG GCGGTGCTGC TGGGCTTCTC GCCCAAGTTC
GGCGCGCTGA TCCAGGCGAT CCCGCTGCCG GTCATGGGCG GCGTGTCCAT CGTGGTGTTC
GGCCTGATTG CGATTGCCGG CGCCAAGATC TGGGTGGACA ACCGGGTGGA CTTCTCGCAG
AACAAGAACC TCATCGTGGC GGCGATCACG CTGATCCTGG GCACGGGCGA ATTCACGCTG
AAGTTCGGCG ACTTCGCGCT GGGCGGCATC GGCACCGCGA CCTTCGGCGC CATCGTGCTC
TACGCGGCCC TGAACCGCGG CAAGTAA
|
|---|
| Protein sequence | MALLQWNERP AQVLQGGGVI GPDERLPWAQ TGLMGIQHVI AMFGATVLAP ILMGFDPNVA
VLMSGIGTLI FFLITGGKVP SYLGSSFAFI GVVIAATAYA GKGPNANIGV ALGGIIACGL
VYTLVGVVVH LVGTGWIERF MPPVVTGAVV AVIGLNLAGI PIKNMAANNF EAWMQALTFV
CVALVAVFTS GMLQRLLILV GLIIASLLYA LLTNGMGLGK PIDVSGIANA AWFGLPQFHA
PVFSAPAMLL IVPVVIILVA ENLGHIKAVT AMTGKNLDQY MGRAFIGDGV ATMVSGAVGG
TGVTTYAENI GVMAATRIYS TAVFLVAALL AVLLGFSPKF GALIQAIPLP VMGGVSIVVF
GLIAIAGAKI WVDNRVDFSQ NKNLIVAAIT LILGTGEFTL KFGDFALGGI GTATFGAIVL
YAALNRGK
|
|---|
| |