Gene Ajs_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0044 
Symbol 
ID4670673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp45521 
End bp45943 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content69% 
IMG OID639837177 
Producthypothetical protein 
Protein accessionYP_984376 
Protein GI121592480 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.338792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.576658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCT GGAAAAAACC CACCACCCTC GCGCTGATCA CCGCCTCCAG CGCCAACACC 
GCCGTGAGCC ACCTTGGCAT CGAGTTCACC GAAGTCGGCG ACGACTTCCT GCGCGCGCGC
GTGCCCGTGG ACGAGCGCAC GCGCCAGCCC TTCGGCCTGC TGCACGGCGG CGTGAGCGTG
GTGCTGGCCG AGACACTGGG CTCGGTGGGC GCCTACCACG CCAGCCCCGA GGGCTGGCTG
GCCGTGGGCC TGGACATCAA CGCCAACCAC CTGCGCGCCG CCAGGAGCGG ATGGGTCACG
GGCACGGCCC GGCCGGTGCA CATCGGCAAG ACCACACAGG TCTGGCAGAT CGACATGGTG
AACGACGCGG GCGAGCTGAC CTGCGTGTCG CGCATCACCA TGGCGATGCT GGCGCCGAAA
TAA
 
Protein sequence
MSLWKKPTTL ALITASSANT AVSHLGIEFT EVGDDFLRAR VPVDERTRQP FGLLHGGVSV 
VLAETLGSVG AYHASPEGWL AVGLDINANH LRAARSGWVT GTARPVHIGK TTQVWQIDMV
NDAGELTCVS RITMAMLAPK