Gene Ajs_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0022 
Symbol 
ID4674419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp24678 
End bp25802 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content72% 
IMG OID639837155 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_984354 
Protein GI121592458 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.788307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACTC TGTTCGATCC CATCCAGGCC GGTGACCTGC ACCTGGCCAA CCGTATCGCC 
ATGGCGCCGC TGACGCGCAA CCGCTCGCCC CGGGCCGTGC CGCGCGACAT CACCGCCACC
TACTACGCCC AGCGCGCCAG CGCCGGCCTG CTGATCACCG AGGGCACGGC CATCACCCAC
CAGGGCCAGG GCTATTCCGA CGTGCCAGGG CTGTACGGCA CCGAGCAACT GGACGGCTGG
AAGCGCGTTA CCCAGGCCGT GCATGCACGT GGCGGCAAGA TCGTCACCCA GCTGTGGCAC
GTGGGGCGCG TGTCGCACAC TGCCCTGCAG CCGGAGGGCG GCGCACCCGT GGCGCCGTCG
GCCGTGCGCG CGCAATCGCA GACCTACTTG GTGGACGCGG CCAGCGGCCA GGGCCAATTC
GTGCCCACGT CCGAGCCCCG CGCGCTGGCG GCCGAGGAAC TGCCGGACAT CGTGCATGCC
TTCGCCGCCG CCGCGCGCAA CGCGGTGCAG ACGGCGGGCT TTGACGGCGT GGAGATCCAC
GGCGCCAACG GCTACCTGCT GGACCAGTTC CTCAAGGACG GCGCCAACCA GCGCAAGGAC
GACTACGGCG GCGGCATCGC CAACCGCGTG CGCCTGATGG TGGAGGTGAC GCGCGCCGTG
GTGGACGCCA TCGGCGGGGG CCGCGTGGGC ATTCGTCTCT CGCCCGTCAC GCCCGCCAAC
GACATCCGCG ACAGCGACCC GCAGCCGCTG TTTGAACACC TGGCACGCGA GCTGGCGCCG
CTGGGCCTGG CCTTCATCCA CGTGATCGAG GGCGCCACCG GCGGCCCGCG CGAGGTGGAA
GGCCGCCCCT TCGACTACGC CGCGTTCAAG AACGCCTACC GCAGCGCGGG CGGGCGCGGC
GCCTGGATGG TGAACAACGG CTACGACCGC GACATGGCCC AGGAGGCGCT GGCCAGCGGC
CGCGCCGACA TCGTGGCCTT TGGCCGCGCG TTCATCTCCA ACCCCGACCT GGTGGAGCGC
CTGCGGCGGG GCGCCCCGCT CAACGCCTGG GACAAAACCA CGTTCTACGG CGGCGGCGAG
CACGGCTACA TCGACTACCC CGCGCTGGAG CAGGTCCCGG CCTGA
 
Protein sequence
MPTLFDPIQA GDLHLANRIA MAPLTRNRSP RAVPRDITAT YYAQRASAGL LITEGTAITH 
QGQGYSDVPG LYGTEQLDGW KRVTQAVHAR GGKIVTQLWH VGRVSHTALQ PEGGAPVAPS
AVRAQSQTYL VDAASGQGQF VPTSEPRALA AEELPDIVHA FAAAARNAVQ TAGFDGVEIH
GANGYLLDQF LKDGANQRKD DYGGGIANRV RLMVEVTRAV VDAIGGGRVG IRLSPVTPAN
DIRDSDPQPL FEHLARELAP LGLAFIHVIE GATGGPREVE GRPFDYAAFK NAYRSAGGRG
AWMVNNGYDR DMAQEALASG RADIVAFGRA FISNPDLVER LRRGAPLNAW DKTTFYGGGE
HGYIDYPALE QVPA