| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0014 |
|---|
| Symbol | |
|---|
| ID | 4673009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 16463 |
|---|
| End bp | 17650 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639837147 |
|---|
| Product | beta-ketothiolase |
|---|
| Protein accession | YP_984346 |
|---|
| Protein GI | 121592450 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.962279 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACC GCGAAGTCTT CGTCGTCAGC ACCGCACGCA CCGCCATCGG CACCTTCGGC
GGCAGCCTGA AGGACGTGCC CAACACCCAG CTCGCCACCA CCGCCGTGAA GGCCGCCATC
GCGCGCGCCG GCATCGCGCC CGACGCCGTG GGCCATGTGG TGATGGGCAA CGTGATCCCC
ACCGACACCA AGGACGCGTA CCTGAGCCGC GTGGCCGCCA TCGACGCGGG CTGCCCCATC
GAGACGCCTG CCTTCAACGT CAACCGCCTG TGCGGCTCGG GCCTGCAAGC CATCATCAGC
GCGGCGCAGG CCATTGGCTA TGGCGACTGC GACGTGGCCG TGGGCGGTGG CTCCGAGAGC
ATGAGCCGGG GCCCCTACTT CGACCAGGGC GCACGCTGGG GCACGCGCAT GGGTGACAGC
AAGAGCATCG ACTACATGCT CGGCATCCTG CACGACCCCT GGCAGAAGAT GCACATGGGC
ATCACCGCCG AGAACGTGGC CGAGCGCTAC CAAATTTCGC GCGAGATGCA GGACCAGCTC
GCCCTGGCCA GCCAGCAGCG CGCCGCCGCT GCCATCGCCG CCGGCTACTT CAAGGAGCAG
ATCGTCCCGG TCGAAATTGC CACGCGCAAG GGCACCGTGC TGTTCCAGGA AGACGAACAT
GTGCGCGCCG CCACCACGCT GGACGTGCTG GCCGGCATGA AGCCCGCGTT CAAGAAGGAA
GGCGGCACGG TCACGGCCGG CAACGCCTCG GGCATCAACG ACGGTGCCTC CGCCGTGGTG
CTGGTGGCGG GCGACCGCCT GCAGGCGCTG AACGTGAAGC CCCTGGCGCG CCTGGTGGGC
TATGCGCACG CCGGCGTGGA CCCGGCCTAC ATGGGCATCG GCCCCGTGCC CGCCACACAG
AAGGTGCTGC AGCGCACCGG CCTGAAGGTG CAGGACATGG ACGTGATCGA GGCCAACGAG
GCCTTCGCCG CCCAGGCCTG CGCCGTGGTG CAGGAGCTGG GCCTTCAGCC TTCCAAGGTC
AACCCCAACG GCTCGGGCAT TTCGCTCGGC CATCCCGTGG GTGCCACGGG CGCCATCATC
ACCACCAAGG CGATTGCCGA GCTGCACCGC ACGGGCGGGC GCTACGCGCT GGTGACCATG
TGCATCGGCG GCGGCCAGGG CATCGCGGCC ATCTTCGAAC GGGTTTGA
|
|---|
| Protein sequence | MTHREVFVVS TARTAIGTFG GSLKDVPNTQ LATTAVKAAI ARAGIAPDAV GHVVMGNVIP
TDTKDAYLSR VAAIDAGCPI ETPAFNVNRL CGSGLQAIIS AAQAIGYGDC DVAVGGGSES
MSRGPYFDQG ARWGTRMGDS KSIDYMLGIL HDPWQKMHMG ITAENVAERY QISREMQDQL
ALASQQRAAA AIAAGYFKEQ IVPVEIATRK GTVLFQEDEH VRAATTLDVL AGMKPAFKKE
GGTVTAGNAS GINDGASAVV LVAGDRLQAL NVKPLARLVG YAHAGVDPAY MGIGPVPATQ
KVLQRTGLKV QDMDVIEANE AFAAQACAVV QELGLQPSKV NPNGSGISLG HPVGATGAII
TTKAIAELHR TGGRYALVTM CIGGGQGIAA IFERV
|
|---|
| |