| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0008 |
|---|
| Symbol | rdgC |
|---|
| ID | 4671890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 8260 |
|---|
| End bp | 9237 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639837141 |
|---|
| Product | recombination associated protein |
|---|
| Protein accession | YP_984340 |
|---|
| Protein GI | 121592444 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2974] DNA recombination-dependent growth factor C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.768093 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCAAGA ACATGATCGT GTACCGCATT GCCCCCGAAT GGCAGGTGGA GCTGACCCAG
CTGGAGGAAG CGCTGGCCAA GGCGCCCTTC CAGGAGTGCG GCGCCACGCA GGAAAAGTCC
AGCGGCTGGG TGCCCCCGCG CGGCGAGGCC CACGGGCTGC TGGCCGAGAG CGTGGGCGGC
CACTGGATGC TGCGCTTCCA ATGGGAAGCC AAGATGCTCC CGGCCACCGT GCTGGCGCGC
AAGGTGAAGG AAAAGGCCGC GCAGATCGAG CAGCAGACCG GCCGCAAGCC CGGCAAGAAG
GAAACCAAGG AGCTCAAGGA AGAGGCCAAG CTGGACCTGC TGCCCATGGC CTTCACCAAG
CAGGGCGGCA CCTGGGTGTG GATCGACCCA CAGGCGCACT TGCTGGTGCT GGACACGGGC
GCCCAAGGCC GTGCCGACGA GGTGGTGAGC CTGCTGGTGG AGCACCTGCC CGGCCTGTCG
CTGGCGCTGC TGGACACGCA GACCAGCCCC CAGGCGGCGA TGGCGCTGTG GCTCAAGGAG
CAGGAGCCGC CGGCGGGCTT TTCCATCGAC CGCGAGTGCG AGCTGAAGGC GCCCGACGAG
ACCAAGGCCG TGGTTCGCTA CGCCCGCCAC CCGCTGGACA TCGAGGAAGT GCAGGGCCAC
ATCGAGGCGG GCAAGCTGCC CACTAAGCTC GCCATGAGCT GGGACGACCG CGTGAGCTTC
GTGCTGACCG AGGGGCTGCA GCTCAAGAAG GTGGCGTTCC TGGACACGGT GTTCGAGGGC
CAGACGCAGG ACGATGGCGG CTTCGATGCC GACGTGGCGA TCGCCACGGG CGAGCTGTCG
CAGCTGATTC CCGACCTGAT CGCGGCGCTG GGCGGCGAGG GGCGCACGAG CCTGGGTGGC
GCTGCTGCCG CCCCCGCACC AACCGCCGGG GCCTTGCATG CCGCGGCCAG CGGCCCCGAC
GACGACGCGC CGTTCTGA
|
|---|
| Protein sequence | MFKNMIVYRI APEWQVELTQ LEEALAKAPF QECGATQEKS SGWVPPRGEA HGLLAESVGG
HWMLRFQWEA KMLPATVLAR KVKEKAAQIE QQTGRKPGKK ETKELKEEAK LDLLPMAFTK
QGGTWVWIDP QAHLLVLDTG AQGRADEVVS LLVEHLPGLS LALLDTQTSP QAAMALWLKE
QEPPAGFSID RECELKAPDE TKAVVRYARH PLDIEEVQGH IEAGKLPTKL AMSWDDRVSF
VLTEGLQLKK VAFLDTVFEG QTQDDGGFDA DVAIATGELS QLIPDLIAAL GGEGRTSLGG
AAAAPAPTAG ALHAAASGPD DDAPF
|
|---|
| |