| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0004 |
|---|
| Symbol | |
|---|
| ID | 4671169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 4216 |
|---|
| End bp | 5019 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639837137 |
|---|
| Product | regulatory proteins, IclR |
|---|
| Protein accession | YP_984336 |
|---|
| Protein GI | 121592440 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.915259 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCA CACGGAACAT CGACTTCGAC GAAGGCGCGG ACAGCCGGCG CTTCGTGACC
GCGCTGGCCC GGGGGCTGGA CGTGCTGGCG TGCTTCCAGG TGGACGAAAA ATGGCTCACC
AATGCCGAGA TCGCCGCGCG CACCGGCCTG CCCAAGCCGA CGGTGGTGCG CCTGGCCTAC
ACGCTGTGCG TGCTGGGCTA CCTGCGCCAT TCGCGCGACA GCGGCAAGTA CGCGCTGGGC
GACAGCCTGG CGGCACTGGG CATCACCATG GTGTCCAACC TGCGGCTGCG GCGCATTGCA
CGGCCCTACA TGCAGGACTT CGCGGACCGC TACGACATCT CGGTGTCGCT GGGCATCCGC
AACGGGCTGT CGGTGCTGTA CGTGGAGAAC TGCCGCTCGG GCACGCCGCT GTCGCTGGGG
CTGGACCTGG GGGCGCGCCT TCCGGTGGCG GAGACGGCCA TGGGCCACGC CCTGCTGGCC
GTGATGGAGC CGCGCGAGCG CGAGCGGCTG CTGGCCGAGA TCCGCCAGGC CGAGGGCGAG
CGCTGGCCGC AATTGCGCCA GTCCATCGAG ACCGGGTGTG CCCACTGGCG GGCGCGTGGC
TTCACGGTGG TGGTGCGCGA CTGGCAGACG GACATCGCGG GCGTGGGCGC CGCCATCCGC
CAGCCCGACG GCCGCGTGAT CAGCTTCAAC GCGGGCGGCT CGGCCAGCAA GTTCCCGCGC
GCGCTGCTGG AGCAGGAGAT CGGCCCGCAG TTCGCACGCA TGGTCAAGGG GCTGGAGCCG
TTCGTGCGCA GCGAGGAAGC GTAA
|
|---|
| Protein sequence | MARTRNIDFD EGADSRRFVT ALARGLDVLA CFQVDEKWLT NAEIAARTGL PKPTVVRLAY
TLCVLGYLRH SRDSGKYALG DSLAALGITM VSNLRLRRIA RPYMQDFADR YDISVSLGIR
NGLSVLYVEN CRSGTPLSLG LDLGARLPVA ETAMGHALLA VMEPRERERL LAEIRQAEGE
RWPQLRQSIE TGCAHWRARG FTVVVRDWQT DIAGVGAAIR QPDGRVISFN AGGSASKFPR
ALLEQEIGPQ FARMVKGLEP FVRSEEA
|
|---|
| |