| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4117 |
|---|
| Symbol | dnaA |
|---|
| ID | 4690222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 4402850 |
|---|
| End bp | 4404247 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639837129 |
|---|
| Product | chromosomal replication initiation protein |
|---|
| Protein accession | YP_984328 |
|---|
| Protein GI | 121606999 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000931933 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0270955 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG CGTCCGTGTC TGGTCAAAAC GATGACTTGT GGCAAATTTG CGTTGACCAT
CTGGCTCAGG AGTTGCCTGA GCAGCAATTC AATACCTGGA TCCGCCCGCT GGTTGTGATT
GTTGCACCCG ATTTGTCCAA AGCGACGGTC CAGGTGGGCA ATCGCTTCAA GCTGGACTGG
GTTCGAGCCC AGTACGCCGC CCGGATTGCT GCACTATTTG AACAACTCTC CGGCCAGAGA
ATCCCGATTG AACTGGCACT CGCGCCACGT GAGGCACCTG TCAAATCAGA ACTCGTGGTT
CGCAAATTTG AACGTGCTGC AGGGGTTGCC GAGTTGGCCA GCGTCGGAAC GCCTGAAGAG
GCAGCCGGTT CTGCCTTCAA AAACCGGCTC AATTCCGCCT TGACGTTTGA CACCCTGATT
GAAGGCACGG CCAACCGCAT GGGCCGGGCT GCGGCGCTTC ATGTCGCCAG CAGTCTGGGT
CAGCTGTACA ACCCGCTGTT TATTTACGGC GGCGTCGGTC TGGGCAAAAC TCACCTGATG
CACGCGATCG GCAACAAACT GATGGCCGAC AACCCGGCAG CCAAGGTTCT GTACATCCAC
GCCGAGCAGT TTGTCTCGGA TGTGGTCAAA GCCTACCAGC GCAAGACGTT TGACGATTTC
AAGGAGCGTT ATCACTCGCT CGATCTGCTG CTGATCGACG ATGTGCAGTT TCTGGCCAAC
AAGGACCGCA CCCAGGAAGA GTTCTTCAAC GCCTTTGAGG CTTTGCTGAC AAAAAAATCA
CACATTGTGA TGACCAGTGA TACCTATCCG AAAGGCTTGG CGGACATCCA TGAGCGCCTG
GTGTCGCGTT TTGACTCCGG CCTGACAGTG GCCATTGAGC CGCCAGAACT GGAGATGCGC
GTAGCCATCC TGATCCGCAA GGCCGATGCC GATGGTGCAG TCCTGCCGGA AGAAGTGGCG
TTTTTTGTCG CCAAAAATGT CCGTTCGAAT GTGCGTGAAC TCGAAGGCGC GCTGCGAAAA
ATACAGGCTT ATTCCCGGTT TAGTCACAAG GAAATTTCCA TCCAGTTGGC CCGGGAAGCA
CTGCGCGACC TGCTGTCGAT CCAGAATCGA CAGATTTCGG TGGAAAACAT CCAGAAGACG
GTGGCCAACT ATTACAAGAT CAAGGTTGCC GACATGTACT CAAAAAAGCG GCCCGCCAAC
ATTGCCCGAC CGCGCCAGAT TGCCATGTAC CTGGCCAAGG AATTGACGCA AAAAAGCCTG
CCCGAGATTG GCGAGTTGTT TGGCGGACGC GACCATACCA CCGTGTTGCA TGCCGTACGA
AAAATGGCGG CCGAGCGGCA ATTGATGACT GAACTCAACC AGCAACTGCA TGTACTGGAG
CAAACGCTCA AGGGTTGA
|
|---|
| Protein sequence | MSAASVSGQN DDLWQICVDH LAQELPEQQF NTWIRPLVVI VAPDLSKATV QVGNRFKLDW
VRAQYAARIA ALFEQLSGQR IPIELALAPR EAPVKSELVV RKFERAAGVA ELASVGTPEE
AAGSAFKNRL NSALTFDTLI EGTANRMGRA AALHVASSLG QLYNPLFIYG GVGLGKTHLM
HAIGNKLMAD NPAAKVLYIH AEQFVSDVVK AYQRKTFDDF KERYHSLDLL LIDDVQFLAN
KDRTQEEFFN AFEALLTKKS HIVMTSDTYP KGLADIHERL VSRFDSGLTV AIEPPELEMR
VAILIRKADA DGAVLPEEVA FFVAKNVRSN VRELEGALRK IQAYSRFSHK EISIQLAREA
LRDLLSIQNR QISVENIQKT VANYYKIKVA DMYSKKRPAN IARPRQIAMY LAKELTQKSL
PEIGELFGGR DHTTVLHAVR KMAAERQLMT ELNQQLHVLE QTLKG
|
|---|
| |