Gene Pnap_4109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4109 
Symbol 
ID4688287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4394405 
End bp4396390 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content61% 
IMG OID639837121 
Productsodium/hydrogen exchanger 
Protein accessionYP_984320 
Protein GI121606991 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.324646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0690123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC TTGAGCTAAC CCTTTTATAT CTACTGGCCT CAGTGCTGGG GGTAGTCATT 
TGCCGCTCAT TTAAGTTGCC GCCCATGCTG GGTTATTTGT CTGTCGGCGT GGTGATTGGT
CCGCACGCGC TGGCGCTGGC GCAAAATTCC GACGGAGTGC GCCATCTGGG GGAATTCGGC
GTGGTGTTTT TGATGTTTGT GATCGGGCTG GAATTCAACC TTCCCAAGCT GCGCTCGATG
CGCCGCCATG TGTTCGGGCT TGGTCTTCTC CAGGTGGCCC TCACCATGGT GCTGGTGACC
CTGGGTTCAC TTTTTCTGGC CGTCGTGGCA CCTGCTCTAT GGAACATGCA ATGGCAAACC
GCCCTGGCCC TGTCAGGCGC AATGGCCATG AGCAGCACTG CCATTGTGGT CAAACTATTG
GCTGAGCGGC TGGAACTGGC CTCCGAGCAC GGCAAGCGCA TCATGGGCAT CCTGCTGCTC
CAGGATCTGG CCGTGGTGCC GTTGCTGGTG CTGATTCCTG CCTTGGGCTC ACCGGCTGAC
GAGTTGTTCA TGGCATTGGG CATTGCCGCC CTGAAAGCGG CCGTGCTGCT GGGCCTGCTG
CTGACCGGAG GGCAGCGCGT CATGCGCTGG TGGCTCACGA TCGTGGCAAG GCGCAAGAGT
GAAGAGCTGT TTGTGCTGAA TTTGCTGCTG GTGACGCTGG CGCTGGCCTG GCTGACCGAG
CTGGCCGGTT TGAGCCTGGC CCTAGGCGCC TTCATCGCCG GCATGCTGAT TTCCGAAACC
CAGTACAAAC ACCAGGTCGA AACCGACATC AGGCCTTTTC ATGATGTACT GCTGGGGCTT
TTTTTCATCA GCGTCGGCAT GATGCTGGAC TGGCATGAGG TTGTGGATCA CTGGGCGCTG
GTGCTACTGC TCTTGACGCT GCCAGTATTG TTCAAGCTGA TCCTGGTGAC TGCCCTGGCA
CGAGTCCTCG GAGCGACGGC CGGTGTATCC CTGCGCACCG GCCTGTACCT GGCGCAGGCC
GGCGAGTTTG GCTTTGTGCT GCTGTCCCTG GCGCAAGGCA GCAAGCTGGT GCCGCCCGCC
CTGATGAATC CCATCCTGGC CAGCATGGTG CTGTCGATGC TGGCCACGCT GTTCATGATC
ATGTATGCCA ACCGCATCGT GATGAAGCTG GTTTCAAGCG AATGGCTGCA ACAGTCGCTT
CAGATGACAA CGATTGCCAG CAAATCCATG AGCGTCAACA AGCACGTCAT CATTTGCGGT
TATGGCCGAT GTGGCCAGAA CCTGGGCCGC ATGCTGGAGC GCGAAGGCAT TCCCTATATC
GCGCTGGACC TGGACCCTGA CCGGGTACGG CAGGCTGCAG CGGCAGGCAA CTCGGTGGTG
TTTGGCGACG CGGTTCGGCT GCAGGCCCTG ATAGCGGCCG GCTTGGCACG GGCCAGTGCC
GTGGTGGTGA CCTACCTGGA CACCGCCAGC GCCCTGAAAG TGCTCGCCAA TACACGTACC
CATGCGCCCA CGGTACCGAT CATTGTTCGC ACCGTTGACG ACCGTGATCT GGAAAAGCTC
AAGGCTGGCG GCGCCACTGA AGTGGTTCCC GAGGCGATTG AAGGCAGTCT GATGCTGGCC
AGCCATGCGC TGGCGCTGGT GGGTGTGCCC ATGCGCCGAG TGATCCGCGT GGTACAGGAC
CAGCGCGATG CGCGCTACAA CCTGCTGCGC GGCTATTTTC GCGGTGCGGA CGATGACACG
GCAGACGAGC TGGAGCAGGA ACGCTTGTCC ACCGTGACAC TTGTTCCTGG GCTCAGTTCA
GTCGGCCAGA CGCTGGGCGA GATGGCGCTG CACACGGTGG ATGTGCGAGT GGTGAGCCTG
CGCCGGGGTA ATGGCAAAAC GCTCAAAGCG CTTGAAGAAA CCAGCCTGGA AGGCGGCGAC
ACGCTGGTCC TGTCGGGGAA ACCGGAAGCA CTGGCGCTGG CCGAGCAGAA ACTTTTGCGC
GACTAA
 
Protein sequence
MSALELTLLY LLASVLGVVI CRSFKLPPML GYLSVGVVIG PHALALAQNS DGVRHLGEFG 
VVFLMFVIGL EFNLPKLRSM RRHVFGLGLL QVALTMVLVT LGSLFLAVVA PALWNMQWQT
ALALSGAMAM SSTAIVVKLL AERLELASEH GKRIMGILLL QDLAVVPLLV LIPALGSPAD
ELFMALGIAA LKAAVLLGLL LTGGQRVMRW WLTIVARRKS EELFVLNLLL VTLALAWLTE
LAGLSLALGA FIAGMLISET QYKHQVETDI RPFHDVLLGL FFISVGMMLD WHEVVDHWAL
VLLLLTLPVL FKLILVTALA RVLGATAGVS LRTGLYLAQA GEFGFVLLSL AQGSKLVPPA
LMNPILASMV LSMLATLFMI MYANRIVMKL VSSEWLQQSL QMTTIASKSM SVNKHVIICG
YGRCGQNLGR MLEREGIPYI ALDLDPDRVR QAAAAGNSVV FGDAVRLQAL IAAGLARASA
VVVTYLDTAS ALKVLANTRT HAPTVPIIVR TVDDRDLEKL KAGGATEVVP EAIEGSLMLA
SHALALVGVP MRRVIRVVQD QRDARYNLLR GYFRGADDDT ADELEQERLS TVTLVPGLSS
VGQTLGEMAL HTVDVRVVSL RRGNGKTLKA LEETSLEGGD TLVLSGKPEA LALAEQKLLR
D