Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4109 |
Symbol | |
ID | 4688287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4394405 |
End bp | 4396390 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639837121 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_984320 |
Protein GI | 121606991 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.324646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0690123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAC TTGAGCTAAC CCTTTTATAT CTACTGGCCT CAGTGCTGGG GGTAGTCATT TGCCGCTCAT TTAAGTTGCC GCCCATGCTG GGTTATTTGT CTGTCGGCGT GGTGATTGGT CCGCACGCGC TGGCGCTGGC GCAAAATTCC GACGGAGTGC GCCATCTGGG GGAATTCGGC GTGGTGTTTT TGATGTTTGT GATCGGGCTG GAATTCAACC TTCCCAAGCT GCGCTCGATG CGCCGCCATG TGTTCGGGCT TGGTCTTCTC CAGGTGGCCC TCACCATGGT GCTGGTGACC CTGGGTTCAC TTTTTCTGGC CGTCGTGGCA CCTGCTCTAT GGAACATGCA ATGGCAAACC GCCCTGGCCC TGTCAGGCGC AATGGCCATG AGCAGCACTG CCATTGTGGT CAAACTATTG GCTGAGCGGC TGGAACTGGC CTCCGAGCAC GGCAAGCGCA TCATGGGCAT CCTGCTGCTC CAGGATCTGG CCGTGGTGCC GTTGCTGGTG CTGATTCCTG CCTTGGGCTC ACCGGCTGAC GAGTTGTTCA TGGCATTGGG CATTGCCGCC CTGAAAGCGG CCGTGCTGCT GGGCCTGCTG CTGACCGGAG GGCAGCGCGT CATGCGCTGG TGGCTCACGA TCGTGGCAAG GCGCAAGAGT GAAGAGCTGT TTGTGCTGAA TTTGCTGCTG GTGACGCTGG CGCTGGCCTG GCTGACCGAG CTGGCCGGTT TGAGCCTGGC CCTAGGCGCC TTCATCGCCG GCATGCTGAT TTCCGAAACC CAGTACAAAC ACCAGGTCGA AACCGACATC AGGCCTTTTC ATGATGTACT GCTGGGGCTT TTTTTCATCA GCGTCGGCAT GATGCTGGAC TGGCATGAGG TTGTGGATCA CTGGGCGCTG GTGCTACTGC TCTTGACGCT GCCAGTATTG TTCAAGCTGA TCCTGGTGAC TGCCCTGGCA CGAGTCCTCG GAGCGACGGC CGGTGTATCC CTGCGCACCG GCCTGTACCT GGCGCAGGCC GGCGAGTTTG GCTTTGTGCT GCTGTCCCTG GCGCAAGGCA GCAAGCTGGT GCCGCCCGCC CTGATGAATC CCATCCTGGC CAGCATGGTG CTGTCGATGC TGGCCACGCT GTTCATGATC ATGTATGCCA ACCGCATCGT GATGAAGCTG GTTTCAAGCG AATGGCTGCA ACAGTCGCTT CAGATGACAA CGATTGCCAG CAAATCCATG AGCGTCAACA AGCACGTCAT CATTTGCGGT TATGGCCGAT GTGGCCAGAA CCTGGGCCGC ATGCTGGAGC GCGAAGGCAT TCCCTATATC GCGCTGGACC TGGACCCTGA CCGGGTACGG CAGGCTGCAG CGGCAGGCAA CTCGGTGGTG TTTGGCGACG CGGTTCGGCT GCAGGCCCTG ATAGCGGCCG GCTTGGCACG GGCCAGTGCC GTGGTGGTGA CCTACCTGGA CACCGCCAGC GCCCTGAAAG TGCTCGCCAA TACACGTACC CATGCGCCCA CGGTACCGAT CATTGTTCGC ACCGTTGACG ACCGTGATCT GGAAAAGCTC AAGGCTGGCG GCGCCACTGA AGTGGTTCCC GAGGCGATTG AAGGCAGTCT GATGCTGGCC AGCCATGCGC TGGCGCTGGT GGGTGTGCCC ATGCGCCGAG TGATCCGCGT GGTACAGGAC CAGCGCGATG CGCGCTACAA CCTGCTGCGC GGCTATTTTC GCGGTGCGGA CGATGACACG GCAGACGAGC TGGAGCAGGA ACGCTTGTCC ACCGTGACAC TTGTTCCTGG GCTCAGTTCA GTCGGCCAGA CGCTGGGCGA GATGGCGCTG CACACGGTGG ATGTGCGAGT GGTGAGCCTG CGCCGGGGTA ATGGCAAAAC GCTCAAAGCG CTTGAAGAAA CCAGCCTGGA AGGCGGCGAC ACGCTGGTCC TGTCGGGGAA ACCGGAAGCA CTGGCGCTGG CCGAGCAGAA ACTTTTGCGC GACTAA
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Protein sequence | MSALELTLLY LLASVLGVVI CRSFKLPPML GYLSVGVVIG PHALALAQNS DGVRHLGEFG VVFLMFVIGL EFNLPKLRSM RRHVFGLGLL QVALTMVLVT LGSLFLAVVA PALWNMQWQT ALALSGAMAM SSTAIVVKLL AERLELASEH GKRIMGILLL QDLAVVPLLV LIPALGSPAD ELFMALGIAA LKAAVLLGLL LTGGQRVMRW WLTIVARRKS EELFVLNLLL VTLALAWLTE LAGLSLALGA FIAGMLISET QYKHQVETDI RPFHDVLLGL FFISVGMMLD WHEVVDHWAL VLLLLTLPVL FKLILVTALA RVLGATAGVS LRTGLYLAQA GEFGFVLLSL AQGSKLVPPA LMNPILASMV LSMLATLFMI MYANRIVMKL VSSEWLQQSL QMTTIASKSM SVNKHVIICG YGRCGQNLGR MLEREGIPYI ALDLDPDRVR QAAAAGNSVV FGDAVRLQAL IAAGLARASA VVVTYLDTAS ALKVLANTRT HAPTVPIIVR TVDDRDLEKL KAGGATEVVP EAIEGSLMLA SHALALVGVP MRRVIRVVQD QRDARYNLLR GYFRGADDDT ADELEQERLS TVTLVPGLSS VGQTLGEMAL HTVDVRVVSL RRGNGKTLKA LEETSLEGGD TLVLSGKPEA LALAEQKLLR D
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