| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4049 |
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| Symbol | |
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| ID | 4687509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4317799 |
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| End bp | 4319460 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639837062 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_984261 |
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| Protein GI | 121606932 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.92854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC CGCAGAACCG GCGTATTTTG CTGATCGACG ACATGCCATC GATCCACGAG
GACTTCCGCA AGATCCTTGC GCCCCGGCCG GCCGCGCGCG AACTCGACAA CTTCGAGGCG
GCGCTGTTTG GCCAGGCCGA GGCGCCTGCG TGCGACGGCT ACGAGCTGGA CTCGGCCTAC
CAGGGGCGCG ACGGCGTGGC GATGGTCGAG GCCGCTGTCC AGGCCGGCCG GCCCTACGCC
ATGGCCTTCG TGGACATGCG CATGCCCCCG GGCTGGGACG GCGTGGAGAC CATCGAGCGG
CTCTGGCGCA TCGACCCGCA GGTGCAGGTG GTGATCTGCA CGGCCTACTC CGACCATGCC
TGGGAGGACG TGCTGGCGCG CCTGGACGTG CAGGACCGGC TGCTGATCCT GAAAAAGCCG
TTCGACATGA TCGAGGTCAG CCAGCTGGCC AGGACGCTGA CGGCCAAGTG GACGCTGGCG
CGGCAGGCGG CGTCGCAGGT GAGCGGCCTG GAGGAGGCCG TGCAGGAGCG GACCCGGGCT
TTGCACGCCA GCGAATCGCA ACTGCACCAG ATCGCGGACA CCTTGCCAGC CTTGATTGCC
TACGTGGACG CAGAACAGCG CTTTCAGTTT CACAACCAGT CCTACGAAGA AGTTTTTGGA
CTGAAGCACG AACAGATCCA CGGCAAGACC CTGCGCGAGA TGATGGGCGG CGAGGTTTAC
GGAAAAGTTC AAGGCAAGGT CGAGGAAGCC TTGGCGGGCT ACTCGGTGCA GTATGACCGC
GTGCAGAAAA CCGCCAATGG CCAGCTTCGC GACTACGTCA TGAAGTACCT GCCGCGCTAT
GGCGAAGACG AGGATGAAGG CAAGGTGCTG GGCTTTTTCG TGCTGGGCGC CGACGTGACC
GAACTCAAAC GCCTTGAGCG CATGAAAGGT GAATTTATCT CAAGCGTCAG CCACGAACTG
CGCATGCCGC TGGTCTCCAT CCGCGGCACG CTGGGCCTGA TCGCGGGAGG TGTTGCCGGC
GAGTTGCCGG CCATGGTCAA AAATCTGGTC GGCATTGCCA CCAATAACTC CGAACGCCTG
ATCAGGCTCC TCAACGACAT TATTGACAGC GAGACCATCG AATCCGGAAC CATGCACTTT
GAACTGCGGC CGGTGGAACT GCTGCCTTTG CTGGCACAGG CCGTCGCGGC CAGCGAGGGC
TTTGCCAGCC AGCACAACAT CAAGCTGATT CTTGATGGCC CGGCAGAGGC GGTGAGCGTC
AATGTTGACC ATGACCGGCT CAGCCAGGTG ATCGCCAATT TGCTGTCCAA TGCCGTGAAA
TTCTCGCCTC CGGCGGCGTC AGTACGCATC CGGCTGCTGC GCCTTGATAA CGGGCGGGTC
CGGGTTGAAG TGGCTGACAG CGGCCCCGGC ATTCCCGAAG AGTTTGGCAA ACGCATCTTC
CAGAGCGGCC CGCAGGCCGA CGCGCCGGAT ACCCAACTCA AGGACGGCAC GGACCTGGGC
CTGAATATCT CGCACTCCAT CGTCGAGCGC ATGGGCGGCA GCATGGGATT CACGACCGAT
GCCGGCACAG GCAGCGTCTT CTTCTTTGAG CTGCCCCAGG CGGTGCCGCT GCCGGTTGAT
GACAGACTGT GGGGCGCGGC CCGTCCACCG CTGAGTGCTT AG
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| Protein sequence | MNKPQNRRIL LIDDMPSIHE DFRKILAPRP AARELDNFEA ALFGQAEAPA CDGYELDSAY
QGRDGVAMVE AAVQAGRPYA MAFVDMRMPP GWDGVETIER LWRIDPQVQV VICTAYSDHA
WEDVLARLDV QDRLLILKKP FDMIEVSQLA RTLTAKWTLA RQAASQVSGL EEAVQERTRA
LHASESQLHQ IADTLPALIA YVDAEQRFQF HNQSYEEVFG LKHEQIHGKT LREMMGGEVY
GKVQGKVEEA LAGYSVQYDR VQKTANGQLR DYVMKYLPRY GEDEDEGKVL GFFVLGADVT
ELKRLERMKG EFISSVSHEL RMPLVSIRGT LGLIAGGVAG ELPAMVKNLV GIATNNSERL
IRLLNDIIDS ETIESGTMHF ELRPVELLPL LAQAVAASEG FASQHNIKLI LDGPAEAVSV
NVDHDRLSQV IANLLSNAVK FSPPAASVRI RLLRLDNGRV RVEVADSGPG IPEEFGKRIF
QSGPQADAPD TQLKDGTDLG LNISHSIVER MGGSMGFTTD AGTGSVFFFE LPQAVPLPVD
DRLWGAARPP LSA
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