Gene Pnap_4045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4045 
Symbol 
ID4688992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4312584 
End bp4313720 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content62% 
IMG OID639837058 
Producthypothetical protein 
Protein accessionYP_984257 
Protein GI121606928 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATC AGCCCTCTCT GCAAATCCGG CGCGGCATTT CGACTGCCAC GCAAGAGCAC 
ATCGCCGTGG CCGAAATCCG GCACCTCATT CACCAGGATC AGGCGCAACT GATTTTGTTT
TTTTGCTCCG CAGCCTACGA CCTCGCCAGG CTCGCGGCCG AATTGCGAAA CGCGTTTGGC
GATACGCCGG TGATTGGCTG CACCACGATT GGGCAACTGG GGCTGGACGG CTATACCAGC
GGCGGCATCA GCGCCATCAG CCTGGCTGGG GATATTGCCG CGCATCCTTT CGCGGTGGAC
CTTGCCGCGA TGGAAGGCAG GATGTCGGGC ATCGCCGACG AAACCAAGCG AATCATCGGG
ATGCATCCGG ATCAACGCCC CTTCGGGCTG CTGCTGGTGG ACGGGTTGTC CCTGATGGAA
GAGCAACTCG CCTCGCTGCT GTACCGGCGC ATGCCGCATC TGCCCATCGT CGGCGGCTCG
GCCAGCGACA ACCCGAGCTT GCAGCAAACC CATGTCTATG TCGATGGCGA GTTCCGTACC
CATACGGCCG TTTTCACGCT GTTCCGCACA CGCCTGCCGT TCCGGACCAT CAAGTTCGCG
CACTTCGTTC CCACGGACAC GACACTGGTC ATCACCCGTT CCGACCAGGA AAAACGCGTG
GTCTATGAGA TCAACGGCGA GCCCGCCGCC CAGGTGTATG CCGACCTGGT CGGCGTGCCC
CTGGAGCAAC TCGGTCTGCC GACTTTTTCC GTCAACCCGC TCATCTTCGA GATGGGCGGG
GAGCAATACA TCCGCGCCAT TGGCGGCGTC AATCCCGACC AAAGCCTCAC GCTGTATTGC
ACCATCGAGA ACGGCATGGT TCTCAGCATT GGGCGCGCGG TCGATCCGGT GGCCAACGCG
CTGGCCGCGT TTGACCGGCT GCGCGAAGAC ATCGGCGAGC CTGCGCTGGT GATCGGATGC
GACTGCCTCC TGCGCCGCCT GGAATTTGAA GGCAGCGGCC TGCTCGATGC GATGGGCGAC
ATCATGAAAT GCAATCAGGT CTTCGGCTTC AGCACTTACG GCGAACAATT CGACGGCATG
CACATGAACC AGACCTTCAC GGGCGTGGCC ATCGGGACGG GTCATGCCCT CGCGTGA
 
Protein sequence
MKNQPSLQIR RGISTATQEH IAVAEIRHLI HQDQAQLILF FCSAAYDLAR LAAELRNAFG 
DTPVIGCTTI GQLGLDGYTS GGISAISLAG DIAAHPFAVD LAAMEGRMSG IADETKRIIG
MHPDQRPFGL LLVDGLSLME EQLASLLYRR MPHLPIVGGS ASDNPSLQQT HVYVDGEFRT
HTAVFTLFRT RLPFRTIKFA HFVPTDTTLV ITRSDQEKRV VYEINGEPAA QVYADLVGVP
LEQLGLPTFS VNPLIFEMGG EQYIRAIGGV NPDQSLTLYC TIENGMVLSI GRAVDPVANA
LAAFDRLRED IGEPALVIGC DCLLRRLEFE GSGLLDAMGD IMKCNQVFGF STYGEQFDGM
HMNQTFTGVA IGTGHALA