| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4042 |
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| Symbol | |
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| ID | 4686148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4308570 |
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| End bp | 4309562 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639837055 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_984254 |
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| Protein GI | 121606925 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.941259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA TTTGTTCAAC ATTCATCGCC GTGCTGGCCC TCGCCACTTG CGCAGTGATG
GCACATGCCG AGCCGATCAC CCTGACGCTG GTCCATGCCG CCTCGACCAC GCACCCGGAA
CACCTGGCGG CGCTGCAGTT TGCCAGGCGC GTCGAAGAGC GCACCCACGG GCAAATCAAG
ACCAGGATAT TCCCGGCGGC CCAGCTCGGC AGCGAAACCG AAATGATCCA GAAAGTCCGA
CTCGGAGCCA TCGACATGGA CTTGGCCTCT CACCACTACC TCATCAATTA TGAGAAGGCC
TTCGCGGTTG TGATCATGCC TTACGTATTC GACAACTATG AGCATGCGCA CCGGGTGCTC
GACGGCCCGG CGATGGCCTG GCTCGCGCCG CTGGCCGAAA AGCAGGGCTT CGTGATCTTG
TCCAACTGGG AATGGGGCTT TCGCAACCTG AGCAACAACC AGCGTCCAAT CAACCAGCCC
GAGGATGTGC GCGGCCTGAA AATACGCGTG CCGCCTGGGG TTGGAATGGA GGCCAGCATG
GAAGCGCTGG GCGCGCAGAT CAGCAAGATC AGCTTCAAGG ATCTCTACGC AGCGTTGTCG
CAAGGACGGG TCGATGGCCA GGAAAACCCG CTCAGTGTCT TTTATCACCA CAAGCTGTAC
GAGTCTCAGA AGCACCTCGC GCTGACGCGG CATGTTTACT ACAACATGGT CCACTTCATC
AGCGTCAAAA GCTGGACCCG GCTCACGCCG GCGCAGCAAA CCATCGTGCG CGAAGAAAGC
AAGGCGGCGG GCGACGGCAT GCGCAAAAAA ATCATGGCCG AAGAGGACGA GCTGATCGCC
AGGCTGGCCG CTGCCGGGGT GAAGGTCACA CGCCCCGACC CCCAGCCGTT CCGCGCCATG
ATGGAGCCCG CCCACAAAAA GATCAAGCTC CTTGCCGGCG AAGAGAACGC ACGCAAGTTC
CTGAACATGG TCGCGGATGA ACGCCGGCCA TGA
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| Protein sequence | MKAICSTFIA VLALATCAVM AHAEPITLTL VHAASTTHPE HLAALQFARR VEERTHGQIK
TRIFPAAQLG SETEMIQKVR LGAIDMDLAS HHYLINYEKA FAVVIMPYVF DNYEHAHRVL
DGPAMAWLAP LAEKQGFVIL SNWEWGFRNL SNNQRPINQP EDVRGLKIRV PPGVGMEASM
EALGAQISKI SFKDLYAALS QGRVDGQENP LSVFYHHKLY ESQKHLALTR HVYYNMVHFI
SVKSWTRLTP AQQTIVREES KAAGDGMRKK IMAEEDELIA RLAAAGVKVT RPDPQPFRAM
MEPAHKKIKL LAGEENARKF LNMVADERRP
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