| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4022 |
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| Symbol | |
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| ID | 4686540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4288398 |
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| End bp | 4289654 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639837036 |
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| Product | amidase |
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| Protein accession | YP_984235 |
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| Protein GI | 121606906 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACTG CAACCCCCAC CGGCATCGAC AGCCTGCGCA TCAACGGCGA GCGCCTGTGG
GCCTCGCTGA TGGAACTGGC CCAGATCGGC GCCACGCCCA AGGGCGGCGT CTGCCGGCTC
ACGCTGACCG ACCTCGACAA GCAGGGCCGC GACCTCGTCA CCGGCTGGGC CAGGGAGGCC
GGCATGACGG TCACCATCGA CCGGATCGGC AACGGCTTCA TGCGCCGCGC CGGGCGCAAC
AACGCCCTGC CGCCCATCGT GACCGGCAGC CACATCGACA CCCAGCCGAC CGGCGGCAAG
TTCGACGGCA ACTACGGCGT GCTGGCCGGC ATCGAGGTCG TGCGCACACT GAACGACCAC
GGCATAGCAA CCGAAGCGCC GATAGAAGTC GCCTTCTGGA CCAACGAGGA GGGTTCGCGC
TTCGTGCCGG TGATGATGGG CTCGGGCGTG TTCGCCAAGG CCTTCACACT CGAACACGCC
TATGCCGCGA CCGACACCGA AGGCAAGACC GTCAGGGACG AGCTGGCGCG CATCGGCTAC
ATCGGCGAGC AGGAGCCCGG CGACCATCCG ATTGGCGCGT ATTTCGAAAC CCACATCGAG
CAAGGCCCGG TGCTCGAAGA CAACGACGTG ACCATCGGCG TGGTGCAGGG CGTGCTCGGT
ATCCGCTGGT TCGACTGCAC GGTGACCGGC ATGGAAGCGC ACGCCGGCCC GACGCCGATG
GCGCTGCGCA AGGACGCGCT GCAGGTCGCC ACCCTGCTGA TGCAGGACGT GGTGGCCAGC
GCGCACCGCC ACGCGCCGCA CGGGCGCGGC ACCGTGGGCA TGGTGCAGGT GTTTCCGAAC
AGCCGCAACG TGATTCCGGG CCGGGTGAAG TTCAGCATCG ACCTGCGCAA CGCCACCGAC
GCGCTGGTCG ATGAAATGGC CGACGAGGTC AAGGCCTACG CGGCCGAACT GAGCGAGGAA
ATGGGCCTGC CCATCCACAT CGAGCTGGTG TCGAGCTACC CGGCGCAGGG TTTCAACCCC
GGCTGCGTCG ATGCCGTGGC CCAGGCCGCC CACAAGCTCG GTTACTCAAG CATGCCGGTG
GTCTCCGGCG CCGGCCACGA CGCGGTGTAC ATGGCCCAGC TGGCCCCGGC AGGCATGATC
TTCATCCCGT GCAAGGACGG CATCAGCCAC AACGAGATCG AGGACGCCAA GCCCGAGCAC
ATCACGGCCG GGTGCAATGT GCTGCTGCAC GCGATGCTGG AGCGGGCTGG GGTTTGA
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| Protein sequence | MDTATPTGID SLRINGERLW ASLMELAQIG ATPKGGVCRL TLTDLDKQGR DLVTGWAREA
GMTVTIDRIG NGFMRRAGRN NALPPIVTGS HIDTQPTGGK FDGNYGVLAG IEVVRTLNDH
GIATEAPIEV AFWTNEEGSR FVPVMMGSGV FAKAFTLEHA YAATDTEGKT VRDELARIGY
IGEQEPGDHP IGAYFETHIE QGPVLEDNDV TIGVVQGVLG IRWFDCTVTG MEAHAGPTPM
ALRKDALQVA TLLMQDVVAS AHRHAPHGRG TVGMVQVFPN SRNVIPGRVK FSIDLRNATD
ALVDEMADEV KAYAAELSEE MGLPIHIELV SSYPAQGFNP GCVDAVAQAA HKLGYSSMPV
VSGAGHDAVY MAQLAPAGMI FIPCKDGISH NEIEDAKPEH ITAGCNVLLH AMLERAGV
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