| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4013 |
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| Symbol | |
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| ID | 4686716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4276806 |
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| End bp | 4278422 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639837027 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_984226 |
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| Protein GI | 121606897 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CCCAAGATGG GACGCGAGCA CGCGCTGCCC GCGCGCTCTT TATCGTCGCT
GCCTTGTCAG CGGCCGCATT TGCCGCACAG GCGGCCGATG TGGAGACCAG CAGCGGACCG
CGTTTTGCCA TCTCGCGCTT CGCCGTGGAG GGAAACAGCG TGCTGCCTGC CGCCGAAGTC
GAACGGCTGC TTGCCGACTT CGCCGGCGCT GATCGCAGCT TTGGCGACGT GCGGCGCGCG
GTGCAAGCGC TGCAGCAGGC TTACCGCCAG CGCGGCTACA GCGGGATCCT CGTGCAGTTG
CCCGAGCAGG AACTTGCCCA GGGCGTGGTG CGCGTTCAGG TGATCGAGCC GCGCATCGGC
CGCGTAAGCG TGCAAGGCAA TCAAGTATTT TCGACCGCCA ACATCCGCGC CAGCCTGCCC
GCGCTGCGCG AAGGCACCCA ACCCAACATC CGGGACATTT CGGCCAGCCT GAAGGTGGCC
AACACCAACC CGGCCAAGCA GCTCACCCTG GCGCTGCAGG GCGCCGAGCA GCCTGATGCG
GTCGATGCCG TGATCAGCGT GACGGAAGAC AAGCCCTGGC GGATCGGGCT GAACGCCGAC
AACACCGGCA GCACCGAGAC CGGCCGCACG CGCCTGGGCG TGCTTTACCA GCACGCCAAC
CTCTGGGACC TGGACCACGT GATGACCCTG CAGTACACCA CCTCGGCCGA AAAGCCGTCG
AAGGTGAGCG TGTTTGGCGT GGGCTACCAC GTGCCGCTGT ATGCGCTGGG CGACTCGATG
GATTTCTTCG CCAGCCACTC CAACGTGGAC TCCGGCACGC TGACGGCCGG TGTGCTGGAC
CTGCAGGTCA GCGGCAAGGG CACGGTCTTC GGTGGGCGCT ACAACCACAA TCTGCCGCTG
TGGGGTGACC TGAGTTCCAC GCTGATCTAC GGCGTGGACT GGCGAGCCTA CAAGAACGAC
ATCGACCTCG GCGGCTTCCA GCTGGGCGAC GATGTCACGG TCCATCCGCT GTCGCTCAGC
TATTCCGGCC AGCTGAGCCT GCCTTCGGCC CTGCTGGGCC TGCAGTTGAC GGGCTTGCAG
AACATCCCTG GTGGCGCGAA CGGCCAGGAC GCGGATTTCA GCCGCCAGCG CGCGGGCGCA
TCGGCCAGCT ACCGCGTGTT GCGCTACGGC GTGGGCTACA ACCGGCAGAT GGAAGGCGAC
TGGCAATTGC GCCTGCAGTT CAACGGCCAG GCGACCCGGG CAGCGCTGGT GCCCGGCGAG
CAGTTCGGCG CCGGCGGAGC CGGTTCGGTA CGCGGCTTCC GGGAGCGTGA AGTCGCTGGC
GACCAGGGCC AGTTTGCCAG CGCGGAAATC CAGTCTCCCA ACTGGTGCCC GGCCACTGCG
GCCATCCCGG TGCAGTGCCG CGCGCTGGCC TTCGTCGATG CCGCCCACGT TTCGCGCAAC
AAGGCCCTGC CGGGCGAAGA GCAGCGCACG TCCATCTCCA GTGCCGGCCT GGGGCTGCGC
TTTGCCCTGG ACCGGCGTGC CAGCCTGCAG GTGGACTACG GCCGCGTGCT TGACGGCGGC
AGCACCCGCG CGGCCGGCGA CAGCCGGGTG CACGTCGCCC TGACTCTTTC CTATTGA
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| Protein sequence | MKKTQDGTRA RAARALFIVA ALSAAAFAAQ AADVETSSGP RFAISRFAVE GNSVLPAAEV
ERLLADFAGA DRSFGDVRRA VQALQQAYRQ RGYSGILVQL PEQELAQGVV RVQVIEPRIG
RVSVQGNQVF STANIRASLP ALREGTQPNI RDISASLKVA NTNPAKQLTL ALQGAEQPDA
VDAVISVTED KPWRIGLNAD NTGSTETGRT RLGVLYQHAN LWDLDHVMTL QYTTSAEKPS
KVSVFGVGYH VPLYALGDSM DFFASHSNVD SGTLTAGVLD LQVSGKGTVF GGRYNHNLPL
WGDLSSTLIY GVDWRAYKND IDLGGFQLGD DVTVHPLSLS YSGQLSLPSA LLGLQLTGLQ
NIPGGANGQD ADFSRQRAGA SASYRVLRYG VGYNRQMEGD WQLRLQFNGQ ATRAALVPGE
QFGAGGAGSV RGFREREVAG DQGQFASAEI QSPNWCPATA AIPVQCRALA FVDAAHVSRN
KALPGEEQRT SISSAGLGLR FALDRRASLQ VDYGRVLDGG STRAAGDSRV HVALTLSY
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