| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4003 |
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| Symbol | |
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| ID | 4686430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4267070 |
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| End bp | 4268272 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639837017 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_984216 |
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| Protein GI | 121606887 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.709384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATTG CCCTTCTGGC GCTGACCATC AGCGCCTTTG CCATCGGAAC GACCGAGTTC
GTCATCGTCG GCCTGCTGCC CACCGTGGCC GCCGACCTGC AGGTCAGCCT GCCATCGGCC
GGCCTGCTGG TCAGCCTGTA CGCGCTGGGC GTCGCCATCG GCGCGCCGGT GCTGACCGCG
CTGACCGGCA AGCTGCCGCG CAAGACGCTG CTGCTGGCGC TGATGGCGCT GTTCACGCTG
GGCAATCTGC TGGCCTGGCA GGCGCCGGGC TACAACTCGC TGGTGGCCGC GCGCATTTTG
ACGGGCCTGG CGCACGGCGT GTTCTTCTCG ATTGGCTCGA CCATCGCGAC CGGCCTGGTG
CCCAAGGAAA AGGCCGCCAG CGCGATTGCC ATCATGTTCA CCGGCCTGAC CGTGGCGCTG
GTCACCGGCG TGCCGCTGGG CACCTTCATC GGCCAGCATT TCGGCTGGCG CGAGACCTTC
CTGGCCGTGT CGGCGCTGGG CGCCATCGCC TTTGCCACCA GCCTGCTGTT CATTCCGCGC
AGCATCAAAC ACACGCCGCC GGCATCGCTG GCGCAGCAGT TCAAGGTGCT GGCCCAGCCG
CGCCTGCTGC TGGTGTATGC GACCACGGCC GTCGGCTACG GCGGCTCCTT CATTCCCTTC
ACCTTCCTGG CGCCCATCCT GCAGCAGTCG GGTTTTGGCG CCAGCGCCAT CGGCTGGGTC
ATGCTGGTAT ACGGCGTGTC GGTGGCGGCC GGCAATATCT GGGGTGGCAA GCTGGCCGAC
CGCAAGGGGC CGATTGCCGC GCTGAAGATC ATCTTCGCGC TGCTGGCCGC CGTGCTGCTG
GTGTTCAACT TCACCGCGCC GCATCCCTAC CTGGCGGTTG CCACCGTGCT GCTGTGGGGC
GCCGTGGCCT TCGGCAACGT GCCGGGCCTG CAGGTGTACG TGGTGCGCCA GGCCGAGCGC
CACACGCCGC AGGCGGTCGA TGTGGCCTCG GGCCTGAACA TCGCCGCCTT CAACCTCGGC
ATCGCCTTTG CGGCCTGGGC CGGCGGACTG GTGGTGACGC ACCTGGGCGT GATGCACACG
CCGTGGATTG GTGCGCTGGT GGTGCTGGGT GCGCTGGCGC TCACGTACTG GAGCGGCCGG
CTCGATGACC GGGAAGGCGT GCCGGCGCGC GCTGCGACGC CCGGCACGGC GCCAGCGCAT
TGA
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| Protein sequence | MPIALLALTI SAFAIGTTEF VIVGLLPTVA ADLQVSLPSA GLLVSLYALG VAIGAPVLTA
LTGKLPRKTL LLALMALFTL GNLLAWQAPG YNSLVAARIL TGLAHGVFFS IGSTIATGLV
PKEKAASAIA IMFTGLTVAL VTGVPLGTFI GQHFGWRETF LAVSALGAIA FATSLLFIPR
SIKHTPPASL AQQFKVLAQP RLLLVYATTA VGYGGSFIPF TFLAPILQQS GFGASAIGWV
MLVYGVSVAA GNIWGGKLAD RKGPIAALKI IFALLAAVLL VFNFTAPHPY LAVATVLLWG
AVAFGNVPGL QVYVVRQAER HTPQAVDVAS GLNIAAFNLG IAFAAWAGGL VVTHLGVMHT
PWIGALVVLG ALALTYWSGR LDDREGVPAR AATPGTAPAH
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