| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4001 |
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| Symbol | |
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| ID | 4686480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4264289 |
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| End bp | 4266526 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639837015 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_984214 |
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| Protein GI | 121606885 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.703594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACT GCTGCAACCA ACCCTCTCAC ACGTCCGCCA TTGCCGACCT TCCGGCCGCG
CCTGTTCCCG CCGGCGCCAC GCGCTTTCGC ATCCCGGCGA TGGACTGCGC GGTTGAAGAG
GCCGACATCC GGCGCGTGCT GGCCGGCGTG CCGGGCATCC GCTCGCTCAA CTTTCAGCTG
GTGGCGCGCA CGCTGACGAT TGATGCGCAG GCCGAAGCCC TTCAGGCGGC GGTCAGCGCG
ATAGGCCAGG CGGGCTACAA GATGCAGCCG TTTACCGACG CCGGGCCAGC CGGCCAAACC
CATGGTGCGC ACGACCATGA GCACGATCAC GCGCACGGCC ACGGCGGCCT GCCCTCGGGC
CTGCCGCGCC TGGCGGGCGC GCTGGGGCTG GCCGGGGTGG CCGAGGTGAT CAGCTTTTTC
GCCCCCGCCG GCCTGCCCTG GACGCTGGCC GGCATGGCGG TGGCGCTGGC CGCCATCTTC
ATGGCCGGGC TGGAGGTGTA CCAGAAAGGC CTCACGGCCT TGTTCAGGCG CCGGCTCAAC
ATCAATGCGC TGATGACGGT GGCCGTCACC GGCGCCTTCC TGATCGGCCA GTGGCCCGAG
GCGGCCATGG TGATGGCGCT GTATTCCATC GCCGAGCTGA TCGAGGCCAT GGCGGTGGAC
CGCGCGCGCA ATGCCATCAA GGGCCTGATG GCACTGGCGC CCGAAGCCGC CGAGCTTCGC
CAGCCGGACG GCCAGTGGAC CAGCGTGCCG CTCAATGACG TGCCGCTGGG CGCCACGGTG
CGCGTGCGGC CCGGCGGGCG CATTCCGCTG GACGGCCTGG TCATGGCCGG CGCCAGCGCG
GTTGATCAGG CGTCGGTCAC AGGGGAAAGC CTGCCGGTGG ACAAGGCGGC GGGCGACAGC
GTGTTCGGCG GCACCATCAG CCAGACCGGC GCGCTGGAGC TGCGGGTCAC GGCGGCCGCC
AGCGACAGCA CGCTGGCGCG CATCATCCAC GCCGTCGAGC AGGCGCAGGG CGCGCGCGCG
CCCACGCAGA CCTTCATCGA CCGCTTCGCC GCCATCTACA CGCCGGCGGT GTTCATGCTG
GCGCTGGCCG TGGCCGTCCT GACGCCGCTG CTGCTTGACT GGACCTGGCT GGAGGCGCTG
TACAAGGCGC TGGTGCTGCT GGTGATTGCC TGCCCGTGCG CGCTGGTGGT GTCCACGCCG
GTCACGGTCG TCAGCGGCCT GACCACGGCG GCGCGGCGCG GCATCTTGAT CAAGGGCGGC
ACCTACCTCG AAGACGCCCG GCGGCTGAAG GCCGTGGCGC TGGACAAGAC CGGCACCATC
ACCCAAGGCA AGCCGGTGCT GGTGGCCTGG CAGGCATGGG GCGGCGCGGA TCAGGCCGAA
GTCGGCCGCC TGGCGGCCAC GCTGGCGGCG CGCTCCGACC ATCCGGTGTC CAGCGCCATC
GCGCAGGGGC TGCGGGCCGG CAACCCGCAA GGCGCCCTGC CGGCAGGGGC AGTTGAGGCG
GTCGAGATGC TTGAGGCGCT GTCGGGGCGG GGCGTCCAGG GCCGGATCGG TGGACAACCG
TACGCGCTGG GCAACCACCG GCTGATGGAG GAGCGCCAGC AATGCTCGCC CGCGCTGGAA
GCGGCGCTGG CCCTGCACGA GCAGCAGGGC CGCACGGTCA CGCTGCTGGC CAGCGCGCAG
GGCGTGCTGG GAATCTTCGC GGTGGCCGAC ACCATCAAGG AAAGCTCGCG CCAGGCGATT
GCCGAGCTGA AGGCGCTGGG CGTGACGCCC GTCATGCTCA GCGGCGACAA CGCCGCCACG
GCCAGCGCGG TGGCGGCGCA GGCCGGCATC ATTGACGTGC GCGGCAACCT GCTGCCCGAG
GAAAAACTGG CCGCCATCCG GCAGCTGCAA GGCCAGTACG GCGCGACCGG CATGATCGGC
GACGGCATCA ACGACGCGCC CGCGCTGGCG CAGGCCGACA TCGGTTTTGC CATGGGCGGC
GCGGGCACCG ACATTGCCAT CGAGGCGGCC GACGTGGTCA TCATGAACGA CAACCTGCGG
CGCATCGCCG AGACGGTGCG CCTGTCGCGG CGCACGCATG CCGTGCTGTG GCAAAACATC
GCGCTGGCCC TGGGCATCAA GGCGGTGTTT TTCGTGCTGG CCGTGTTCGG CAGCGCGACC
ATGTGGATGG CTGTGTTCGC CGACATGGGC GCCAGCCTGC TGGTGGTGGC CAACGGCCTG
CGGCTGCTGC GCCGCTAG
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| Protein sequence | MTDCCNQPSH TSAIADLPAA PVPAGATRFR IPAMDCAVEE ADIRRVLAGV PGIRSLNFQL
VARTLTIDAQ AEALQAAVSA IGQAGYKMQP FTDAGPAGQT HGAHDHEHDH AHGHGGLPSG
LPRLAGALGL AGVAEVISFF APAGLPWTLA GMAVALAAIF MAGLEVYQKG LTALFRRRLN
INALMTVAVT GAFLIGQWPE AAMVMALYSI AELIEAMAVD RARNAIKGLM ALAPEAAELR
QPDGQWTSVP LNDVPLGATV RVRPGGRIPL DGLVMAGASA VDQASVTGES LPVDKAAGDS
VFGGTISQTG ALELRVTAAA SDSTLARIIH AVEQAQGARA PTQTFIDRFA AIYTPAVFML
ALAVAVLTPL LLDWTWLEAL YKALVLLVIA CPCALVVSTP VTVVSGLTTA ARRGILIKGG
TYLEDARRLK AVALDKTGTI TQGKPVLVAW QAWGGADQAE VGRLAATLAA RSDHPVSSAI
AQGLRAGNPQ GALPAGAVEA VEMLEALSGR GVQGRIGGQP YALGNHRLME ERQQCSPALE
AALALHEQQG RTVTLLASAQ GVLGIFAVAD TIKESSRQAI AELKALGVTP VMLSGDNAAT
ASAVAAQAGI IDVRGNLLPE EKLAAIRQLQ GQYGATGMIG DGINDAPALA QADIGFAMGG
AGTDIAIEAA DVVIMNDNLR RIAETVRLSR RTHAVLWQNI ALALGIKAVF FVLAVFGSAT
MWMAVFADMG ASLLVVANGL RLLRR
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