Gene Pnap_4000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4000 
Symbol 
ID4688065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4263776 
End bp4264228 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content60% 
IMG OID639837014 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_984213 
Protein GI121606884 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.166717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG AAATCAGACG GAAAATCCTG GCGCTGCTGG ACCAGCATCG AATCATGACG 
GTGGCGACGC TGCGGCCCGA TGGCTGGCCA CAGGCAACGA CGGTCGGCTA CGTGAACGAA
GGCTTGAGCC TGTATTTTCT GTGCGGGCTG GACAGTCAGA AGGCCAAAAA CCTGGCGCTG
GATGATCGGC TTTCACTGAC CATCGATCAC GACACGGCGG ACTTGATGGC AATCACCGGC
CTGTCGATGG CGGCACGCGC GCAGGCGGTC GATGACCGGG CCGAAGCGGA AAAAGTCTTG
CGCATGCTGC CGCTGAAATA CCCCGAGGCA CCGCCTCTGC CGATGAAGAT GCCGAGCCCG
GACGAGGTCC GCATCTTCCG CGTCACGCCC ACGGTCATTT CCGTGCTGGA TTACTCCAAA
GGCTTCGGGC ATACGGATCT CGTCATTTGC TGA
 
Protein sequence
MDDEIRRKIL ALLDQHRIMT VATLRPDGWP QATTVGYVNE GLSLYFLCGL DSQKAKNLAL 
DDRLSLTIDH DTADLMAITG LSMAARAQAV DDRAEAEKVL RMLPLKYPEA PPLPMKMPSP
DEVRIFRVTP TVISVLDYSK GFGHTDLVIC