Gene Pnap_3991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3991 
Symbol 
ID4686233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4258147 
End bp4258614 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content63% 
IMG OID639837007 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_984206 
Protein GI121606877 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.463262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.542881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCATG CCCAGCGCAT CACCCTTTTT CAAAAGGAGA TTGCCATGCA AGTCCAGCCC 
TACCTGTTTT TCGACGGCCG CTGCGAGGAG GCCCTTGATT TTTACCGTGC CGCGCTCGGC
GCCGAAGTCA CCATGCTGAT GCGCTTCAGG GAAAGCCCCG AGCCGCAGCC GCCGGGCATG
TGCGCGCCGG GTTCCGAAGA CAAGGTAATG CACGCCAGCT TTCGCATCGG CGAGACCGAA
CTGATGGCCT CCGACGGACG CGCCATGGGG CAGCCGGAAT TCAAGGGCTT TTCGCTGTCG
GTGTCACCGG CAAGCGATGA CGAAGCCCGC AAGCTGTTCA GCGCCCTGGG CGACGGCGGG
CAGGTGCAGA TGCCGCTGGA CAAGACGTTT TTTGCCTCAT CGTTCGGCAT GGTGGCCGAC
CGCTTCGGTG TGTCGTGGAT GGTGATCGTG CCGCTGGCGC CGGCCTGA
 
Protein sequence
MAHAQRITLF QKEIAMQVQP YLFFDGRCEE ALDFYRAALG AEVTMLMRFR ESPEPQPPGM 
CAPGSEDKVM HASFRIGETE LMASDGRAMG QPEFKGFSLS VSPASDDEAR KLFSALGDGG
QVQMPLDKTF FASSFGMVAD RFGVSWMVIV PLAPA