Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3962 |
Symbol | |
ID | 4688068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4228036 |
End bp | 4229019 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639836979 |
Product | ApbE family lipoprotein |
Protein accession | YP_984178 |
Protein GI | 121606849 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.376919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0354055 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCC GTACTTTGCT GCAGTCCAGC CTGGGCCTGG GCGCCGCACT GGCCGGGTTG ACGGGCAACG CGGCCACGCT CCAATGGCGT GAGCGCGCCC TGCTCGGCTT CGGCACCACG CTGACGCTCA AGGTGGCGCA TGCCGACGCC GCGCAGGCCG AAGCCGCGCT GGACGCGGCC GTTGCCACCA TCCGCCACAT CGAAGACCAG ATGAGCCTGT TCAACCCGGC CAGCGCGCTG GTGCGGCTCA ACCAGGACGG CGTGCTGCGC CAGCCGCATC CCGACCTCGT GGCGGTGCTG GAACTGGCGC AATCGGTATC AAGGCGCAGC CAGGGGGCTT TCGATGTCAC CGTGCAGCCG CTGTGGGCGG TGTTCGAGGC CGCCGCGCGT TCGGGGACAC TGCCGTCGCC GGCTGACGTG GCAAAGGCGC GGGCGGCCGT GGGCTGGCAG CAACTCGCCA TCTCAGGCAG CGAAATCCGC TTGCGCCAGC GCGGCATGGG CGTGAGCCTG AACGGCATCG CCCAGGGCTT TGCCGCCGAC CGGGTGCGCG CCGGGCTGCA GGCGCGCGGC ATCCGGCACG CCCTGGTCAA TACCGGCGAA TGGACCGCGC TGGGCAACCC GCAAGCCACG CGCCCGTGGC TGCTGGGGCT GGCCGACCCG CGCCACGAAC CGGCGCTGCT GGCCCGGCTG GCGCTGGACG GCCGCAGCGT CGCCACGTCG GCCGACAACG AATGCAGCTT CAGCGCGGAC AAGCGCCACC ACCACATCTT CGACCCGCAC ACCGGCTACT CGCCCGCCGA ACTCGCCAGC GTCACCGTCG CCGCGCCCAG CTGCGCCCTG GCCGACGCGC TGACCAAGGT GATGTTCGTC GCCGGATTCG AAGGCGCGCT GCGCCTGGCG CGGCAGTGGC AGGTCGATGT GCTGGTGGTG GACAAGCAGG GGCGCTGGCA GGCCACAAAG GGTTTGCAGT TGCAGGCGGC TTGA
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Protein sequence | MKRRTLLQSS LGLGAALAGL TGNAATLQWR ERALLGFGTT LTLKVAHADA AQAEAALDAA VATIRHIEDQ MSLFNPASAL VRLNQDGVLR QPHPDLVAVL ELAQSVSRRS QGAFDVTVQP LWAVFEAAAR SGTLPSPADV AKARAAVGWQ QLAISGSEIR LRQRGMGVSL NGIAQGFAAD RVRAGLQARG IRHALVNTGE WTALGNPQAT RPWLLGLADP RHEPALLARL ALDGRSVATS ADNECSFSAD KRHHHIFDPH TGYSPAELAS VTVAAPSCAL ADALTKVMFV AGFEGALRLA RQWQVDVLVV DKQGRWQATK GLQLQAA
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