Gene Pnap_3951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3951 
Symbol 
ID4688603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4215649 
End bp4216350 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content60% 
IMG OID639836968 
Productintegral membrane protein TerC 
Protein accessionYP_984167 
Protein GI121606838 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0480576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAGT TCATGACGGC GGGTTTTTGG CTGGCGGTCG GCCAGATCAT CATGATCGAC 
ATTCTGCTGG GTGGCGACAA TGCGGTGGTT ATTGCCCTCG CTTGCCGCAA CCTGCCCGGA
AAGCTGCGGA CCCGAGGCAT CATTTATGGC ACTGCGGGTG CCATCATCCT GCGCGTGATC
CTGATCGCCT TTGCGCTGGC CCTGCTGGCC ATTCCTTACC TCAAGATTGT CGGAGCCGTT
TTGCTGCTGT GGATTGGTGT GAAACTGCTG CAGCCCGAAG ACGAGGGCGA TCACAACATC
AGTTCAAGCG ACAAGCTCTG GGGCGCGGTC AAGACCGTCA TCATTGCCGA CTTGGTCATG
AGCGTGGACA ACGTCTTGGC CATTGCCGGT GCCGCGCAGG GCGCGCACCA GACGCACCAG
TTGCCGCTGG TCATCTTTGG CCTGCTGGTC AGCATCCCCA TCATCGTCGG CGGCAGCCAG
CTGGTGCTCA AGCTGATGGA GCGTTTTCCG GTCGTCATTA CGCTGGGCGC CATGCTGCTG
GGCTGGATTG CAGGCCAGAT GGCTTACTCC GACCCGGCCA TCAAGCCTTA TCTGCCCGAA
TCGGCATTCT TGGGTTATGC CGTGGCTGCT GCGGGTGCGC TCTTGGTGCT GGTGATTGGC
AAAGTGATGC AGGCACGTCA AAAGCCGGCT GAAGCGGGCT GA
 
Protein sequence
MEEFMTAGFW LAVGQIIMID ILLGGDNAVV IALACRNLPG KLRTRGIIYG TAGAIILRVI 
LIAFALALLA IPYLKIVGAV LLLWIGVKLL QPEDEGDHNI SSSDKLWGAV KTVIIADLVM
SVDNVLAIAG AAQGAHQTHQ LPLVIFGLLV SIPIIVGGSQ LVLKLMERFP VVITLGAMLL
GWIAGQMAYS DPAIKPYLPE SAFLGYAVAA AGALLVLVIG KVMQARQKPA EAG