| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3919 |
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| Symbol | |
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| ID | 4689646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4181999 |
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| End bp | 4183648 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639836937 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_984136 |
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| Protein GI | 121606807 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.749041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000945115 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGACTTCTT CGAACCGCTC TGACAACACC CCGCCACAGC CGCGCCATGC CTGGCGCCGG
CTGGTGCTGG TGCTGGCGCT GGCGCTGTGC CAGCTTGCGC CGCCCCTCTC GCTGGCCCAG
ACGGCGGGCG CCGCGCCTGG CCGGGCAACC GGCTCGCTGC CGTCGCTGGG CGACAACTCC
GAGCTGTCCG CCGCCGCCGA GCGCCGCATC GGCGACCGCA TTGCCGTCAG CATTTACCGC
GACCCCGACT ATGTCGATGA CCCGGTGCTG GTGGACTACC TGCAGGGCAT CTGGCAGCCG
CTGATGGCTG CCGCGCGCGC GCGGGGCGAG CTGCCGGCGG AACTCGACGA GCGCTTTGCC
TGGGAACTGT TCCTGATCCG CGACCGCAGC ATCAACGCAT TTGCCCTGCC CGGCGGCTAT
TTTGGCGTGC ACCTGGGCCT GATCGGCACC GTGGGCAGCG CCGATGAACT GGCCGCCGTG
CTGGCCCATG AAATGAGCCA TGTCACGCAG CGGCATATTT CGCGGCTGAT GACGCAGCAG
TCCCGGCAGG CGCCGTGGAT GATTGCGGCA ATGATTTTGG GGGTGCTGGC CGCCAACAAG
AACCCCAACG CGGGCAGCGC GGCCATCGTC GGCGGGCAGG CACTGGCGGC GCAGGGGCAG
CTGAATTTTT CGCGCGACAT GGAGCGCGAG GCCGACCGCG TCGGCTTTGG CGTGATGGAG
GGCGCCGGCT ATGCCAGCCG GGGCGTCTCG GGCATGTTCG AAAAGCTGCA GCAGGCCAAC
CGGCTCAATG ACAACGGCTC GTTTCCCTAC CTGCGCTCGC ACCCGCTGAC CACCGAGCGC
ATCGCCGAGG CGCAGGCCCG CGTGCAGCTG GCGTCGGCGG CAGCCAAGCC GTCACCCGAG
AAGCTGGCCG CCGAGAGCCG CACGCAGCTG CTGCACGCGA TGATGGCCCC CCGCGCCCGC
ATCCTGGCCG TTCCCGGCGT GGATGCGCTG CGCACCATGC TGGCCGAGGG CCAGCGCAGG
GCGGCTGCCT TGCCCGCGCC GCAGCCGGCG GCGCCAGCGG TGTCGGCGGC CACGGTCCGC
GATGCTGGCG CGCTGTATGG CGGCGCCTTC GCTGCCGCCC AGCTGCGTGA TTTTTCGGCG
GCGCGCAACC TGCTCGGCCG GCTCAAGCCG CTCACCGCCG ACATCGGGCC TGCGGCCAAG
GCCGCCGAAC TGCTGGCCAT CGAGGTCGAT TTGCTGGAGG GCAAAATACC GGCGTCCGCA
GCCTCGGCCG ACATCGGCAA GGCCGGCTCG CGGGCCGAGT TGCTGCTGCA GGCGAAGGCG
CTGATGGCGG CCAGCCGCGC GCCGGACGTG TCGCAGGCGC TGCAGACCTG GGTGGCCGTG
CATCCCCGCG ATGCGATGGC CTGGCAGTTG CTGGCCGTTG CCTGCGGCCA GCAAAACCAG
CCGGTGCGGG CGATCCGGGC CGATGCCGAA AGCCGCGCCG CCCAGCTCGA CTACGCCGCT
GCGCTGGACC GCTTCAAGGC GGCGCAGGGC TTGATGCGCA GCAGCCCGGC CAGCGCCGAT
TATGTGGAAG GCTCGATCAT CGACACCCGC ACCCGGCAGG TCGAGTCAAT CCTTAAAGAG
CAGGCGCTCG AGGACAAAGT CAATCGCTAG
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| Protein sequence | MTSSNRSDNT PPQPRHAWRR LVLVLALALC QLAPPLSLAQ TAGAAPGRAT GSLPSLGDNS
ELSAAAERRI GDRIAVSIYR DPDYVDDPVL VDYLQGIWQP LMAAARARGE LPAELDERFA
WELFLIRDRS INAFALPGGY FGVHLGLIGT VGSADELAAV LAHEMSHVTQ RHISRLMTQQ
SRQAPWMIAA MILGVLAANK NPNAGSAAIV GGQALAAQGQ LNFSRDMERE ADRVGFGVME
GAGYASRGVS GMFEKLQQAN RLNDNGSFPY LRSHPLTTER IAEAQARVQL ASAAAKPSPE
KLAAESRTQL LHAMMAPRAR ILAVPGVDAL RTMLAEGQRR AAALPAPQPA APAVSAATVR
DAGALYGGAF AAAQLRDFSA ARNLLGRLKP LTADIGPAAK AAELLAIEVD LLEGKIPASA
ASADIGKAGS RAELLLQAKA LMAASRAPDV SQALQTWVAV HPRDAMAWQL LAVACGQQNQ
PVRAIRADAE SRAAQLDYAA ALDRFKAAQG LMRSSPASAD YVEGSIIDTR TRQVESILKE
QALEDKVNR
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