| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3880 |
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| Symbol | |
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| ID | 4689475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4133447 |
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| End bp | 4134682 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639836898 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_984097 |
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| Protein GI | 121606768 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC TGCAAGCCTT CAAATTCGAG TTGATGCCCG GCGGCGGGCA GCAGCGTGAC
ATGTGCCGCT TCGCCGGGGC GCGCAGGTTT GTCTTTAACC GGGCTTTGGA TATTCAAAAG
GCCAACTACG CAGCAGGCGG CAAATTCATC GGTTACGTCG ATATGGCGAA CCGCCTTCCT
GAGTGGAAAA AAGAGTTTGA ATGGCTCAAG GAGCCGCCCT CGCAATCCTT GCAGCAATCG
CTGAAAGATT CGGAGCGCGC GTTCAAAAAC TTCTTTGAAA AACGCGCGGG CTTTCCGCAG
CCCAAGAAGA AAGGCCGTGG CGAAAGTTTC CGTTTCCCGC AAGGCTTCAG GATCGACCAG
TCCAACAGCC GCACCTTCTT GCCCAAACTC GGATGGATGC GCTACCGCAA CAGCCGGGGC
ATTCTTGGCA CGGCCAAGAA CATCACCGTC AGCCAAACGG GTGGCAAATG GTTTGCCAGC
ATCCAGACCG AGCGAGAAGT CGGGCAACCC ATTCCAGCAG CCACCAACGC CATCGGCATC
GACATGGGAA TTGCCCGATT CGCCACCCTG AGCGACGCCA GCTTTGTTGA GCCGCTGGAC
AGCTTCAAGA AGCATGAACA CAGGCTCAAA AAGTACCAGC GGCGCATGAG CCGCAAAGTC
AAAAACAGCC GGAACTGGCA CAAAGCCAAA AGGAAGGTGC AAAACATCCA CACCCGTATC
GGTAACGCCC GCAAAGATTT CCTGCACAAG AAGACAAGCG AGATCAGCAA AAACCACGCC
ATGGTCGCTA TTGAGGACTT GCAGGTGGGC AATATGTCCA AGTCGAGCAA AGGCACCGCC
GAAGCACCGG GGAAAAACGT CGCGGCCAAG TCGGGACTTA ACAAAGCCAT CCTCGATCAG
GGCTGGTTCG AGTTTCGCCG CCAGCTGGAA TACAAGCTCG CTTGGAGCGG CGGGATACTC
ATTGCAGTGC CCGCGCACTA CACCAGCCAG ACCTGTCCTG CCTGCGGTCA CATTGCCAAG
GAAAACCGGC AAACGCAGGC TCGGTTTGCG TGTGTGGACT GTGGCTACCA GAACCACGCC
GATGTGGTTG GCGCGATGAA CATATTGGCG CGGGGATACC GCGTTGCAGC CTGTGGAGAG
GACGGCTCTG GCTCTGGTCG AAAGACCAGA ACGAAACCAG CCTCTGTGAA GCAGGAACCC
GCCGAAGTGA CTATGCGTGA GGCAGCTCAT GCGTAG
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| Protein sequence | MKRLQAFKFE LMPGGGQQRD MCRFAGARRF VFNRALDIQK ANYAAGGKFI GYVDMANRLP
EWKKEFEWLK EPPSQSLQQS LKDSERAFKN FFEKRAGFPQ PKKKGRGESF RFPQGFRIDQ
SNSRTFLPKL GWMRYRNSRG ILGTAKNITV SQTGGKWFAS IQTEREVGQP IPAATNAIGI
DMGIARFATL SDASFVEPLD SFKKHEHRLK KYQRRMSRKV KNSRNWHKAK RKVQNIHTRI
GNARKDFLHK KTSEISKNHA MVAIEDLQVG NMSKSSKGTA EAPGKNVAAK SGLNKAILDQ
GWFEFRRQLE YKLAWSGGIL IAVPAHYTSQ TCPACGHIAK ENRQTQARFA CVDCGYQNHA
DVVGAMNILA RGYRVAACGE DGSGSGRKTR TKPASVKQEP AEVTMREAAH A
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