| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3843 |
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| Symbol | pyrF |
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| ID | 4687849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4100700 |
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| End bp | 4101548 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639836861 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_984060 |
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| Protein GI | 121606731 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.181506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTTA TCGACATGCT CGGCGCCGCA GAACGCCAGA ACCACTCCAT GCTGTGCGTC
GGCCTGGACC CGGAACCCGC CCGCTTTCCC GGCCGGCTTG CGGGCGATGC CAGCAAAATC
TACGATTTCT GCGCCGCCAT CGTCGATGCG ACCGCCGACC TGGTGATCGC CTTCAAGCCG
CAGATCGCCT ACTTCGCCGC CCATCGCGCC GAGGACCAGC TGGAACGCCT GATGGCGCAC
ATGCGCCGCG TCGCGCCGCA GGTTCCCGTC ATCCTCGACG CCAAGCGCGG CGATATCGGC
AGCACCGCCG AGCAGTACGC CATTGAGGCC TTCGAGCGCT ACGGCGCCGA TGCGGTGACG
CTGTCGCCCT TCATGGGCTT TGATTCGGTC GCGCCTTATT TGAAGTACCA CGGCAAGGGC
TCTTTCTTGC TGTGCCGCAC CTCCAACCCG GGCGGCGACG ACCTGCAGAA CCAGCGCCTG
GCGTCGGTGG ACGGCCAGCC GCTGCTGTAT GAACATATCG CCCGCCTGGC GCAAGGCCCG
TGGAACCTCA ACGGCCAGCT CGGGCTGGTG GTCGGCGCGA CCTATCCGGC CGAGATCGAG
CGCGTGCGGG CGGTGGCGCC GACGCTGCCC CTCTTGATTC CCGGCGTGGG CGCGCAGGGC
GGCGATGCGG CGGCCACGGT GCGCGCCGGC TGGCGGCCGG GCGCGCCGAT CATCGTCAAC
TCGTCGCGGG CGATTATTTA TGCCTCGTCA GGCGATGATT TTGCCGACGC GGCGCGGCGC
GAGGCGCTCA GGACGCGCGA CGTGCTGCAG GCTGCGCGCG CCGATTCGCT GCGCGTGGCC
ACGCCCTGA
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| Protein sequence | MTFIDMLGAA ERQNHSMLCV GLDPEPARFP GRLAGDASKI YDFCAAIVDA TADLVIAFKP
QIAYFAAHRA EDQLERLMAH MRRVAPQVPV ILDAKRGDIG STAEQYAIEA FERYGADAVT
LSPFMGFDSV APYLKYHGKG SFLLCRTSNP GGDDLQNQRL ASVDGQPLLY EHIARLAQGP
WNLNGQLGLV VGATYPAEIE RVRAVAPTLP LLIPGVGAQG GDAAATVRAG WRPGAPIIVN
SSRAIIYASS GDDFADAARR EALRTRDVLQ AARADSLRVA TP
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