Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3833 |
Symbol | |
ID | 4687801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4089864 |
End bp | 4090637 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639836851 |
Product | ABC transporter related |
Protein accession | YP_984050 |
Protein GI | 121606721 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAA ACCATGCTTT AGGGCTGGAA GTCAGCGGCC TGCGCGTCAG TTTTGACGGC TTTGTGGCCG TGGCCGACAC CTCGTTTCGC GTCGCGCCGG GCGAGAGCTT CGGCATCGTC GGTGAGTCGG GCTCGGGCAA ATCGACGGTG CTGCGCGCCA TCTGCGGCCT GGCGCCCAGG GAATCGGGCA CGGTGCAGCT TGTCGGCGGC GATGAAAACC CTGCGCCCGG CAGCAAGGCC TTCCGGCGCC GCGTGCAGAT GGTGTTCCAG GACCCCTACG GCTCGCTGCA CCCGCGCCAG ACGGTGGACC GGCTGCTGGC CGAGCCGCTG GCGATTCATG GCATCAGGGA CGCGGAAACG CGCATCGAAC GCGCGCTCGA TGAAGTCGGC CTGGGAACGG GCTTTCGCTT TCGCTACCCG CACCAGCTGT CGGGCGGGCA GCGCCAGCGC ATCGCGATTG CCCGCGCCCT GATCCTGGAG CCGCAGGTGT TGCTGCTCGA CGAGCCGACT TCGGCGCTCG ATGCGTCGGT GCAGGCCGAA GTGCTGAACC TGCTCGAAGA CCTGCGGCGG CGCCGAAACC TGACCTTCAT CATGGTCAGC CACGACCTGG CGGTGGTCAC GCACCTGTGC GAGCGGCTGA TGGTGATGCA GCGCGGCCAG ACGGTCGAAC TGCTGGCGTC GAGCGACCTG GCGGCCCGCC GCGTGGCCGA CCCGTACACG CTGAGCCTGA TGCAGGCCTC GTCGGGCTTT CAGCGCAAGG AAGCTGTGGT TTAA
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Protein sequence | MSANHALGLE VSGLRVSFDG FVAVADTSFR VAPGESFGIV GESGSGKSTV LRAICGLAPR ESGTVQLVGG DENPAPGSKA FRRRVQMVFQ DPYGSLHPRQ TVDRLLAEPL AIHGIRDAET RIERALDEVG LGTGFRFRYP HQLSGGQRQR IAIARALILE PQVLLLDEPT SALDASVQAE VLNLLEDLRR RRNLTFIMVS HDLAVVTHLC ERLMVMQRGQ TVELLASSDL AARRVADPYT LSLMQASSGF QRKEAVV
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