Gene Pnap_3828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3828 
Symbol 
ID4687976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4084139 
End bp4085074 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content62% 
IMG OID639836846 
Producthypothetical protein 
Protein accessionYP_984045 
Protein GI121606716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.795304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGCA CTTCCATTTT CACCCGCCGC AAGGTGGTTT TCCTCGTTGC CTCGCTGTGC 
TGCCTGCTCT GGGGCAGCGC CTACCCGGCG ATCAAGAACG GCTATGCGCT GTTCAACATC
GCGGCCGGCG ATATTCCATC CAAGCTGGTG TTTGCCGGTT ACCGCTTCCT GTTTGCCGGC
CTGGTGCTGC TGGCGATTGC CGCCATCGGC AAGAAGACGC TGCGGCTGGA GCGGCGCACG
CTGGGCCAGG CGGCGCTGCT GGGCCTGACC CAGACCAGCC TGCAATACGT GTTTTTCTAC
ATCGGCCTGG CGTATGCCAC TGGGGTGAAA AGCTCGATCA TGAACGCCAC TGGCACTTTT
TTCAGCGTGC TGCTGGCCCA CTGGATTTAT AAAAATGACC GGCTCAGCGC CAACAAGGCG
CTGGGCTGCC TCATCGGATT TGCCGGCGTG ATGGTGGTCA ACTTCAGCGC GGGCCTGCTG
AGCTTTGATG TCGCGCTGCG GGGCGAGGGC TTCATCGTGA TCGCCGCCTT CGTGCTGTCA
GCGGCCAGCA TCTACGGCAA GAAGGTGTCG CAGCAGGTCG ATTCGGTGGT GCTGACCGGC
TACCAGCTGG CGATTGGCGG GCTGGCGCTG CTGCTGCTCG GCTTTGCCGC CGGCGGCACG
CTGAGCGGCT TCACCGTCAA ATCGGCCGCC CTGCTGGCTT ACCTGGTGGT GCTGTCGTCC
GCCGCGTTTG CGCTCTGGAC GATTTTGCTC AAGTACAACC GGGTCAGCAT GGTGACGGTG
TTCAACTTCA TGGTTCCGGT GTTCGGCACC ATGCTGTCGG CGCTGTTCTT GGACGAACGC
ATCCTGGAGT GGAAAAACGG CGTGGCGCTG CTGCTGGTGT GCCTGGGCAT CTGGCTGGTC
ACCAGGGAAG AAAAACCGGC GCTGGCCGTG GCGTGA
 
Protein sequence
MNSTSIFTRR KVVFLVASLC CLLWGSAYPA IKNGYALFNI AAGDIPSKLV FAGYRFLFAG 
LVLLAIAAIG KKTLRLERRT LGQAALLGLT QTSLQYVFFY IGLAYATGVK SSIMNATGTF
FSVLLAHWIY KNDRLSANKA LGCLIGFAGV MVVNFSAGLL SFDVALRGEG FIVIAAFVLS
AASIYGKKVS QQVDSVVLTG YQLAIGGLAL LLLGFAAGGT LSGFTVKSAA LLAYLVVLSS
AAFALWTILL KYNRVSMVTV FNFMVPVFGT MLSALFLDER ILEWKNGVAL LLVCLGIWLV
TREEKPALAV A