Gene Pnap_3807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3807 
Symbol 
ID4686783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4059845 
End bp4060870 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content62% 
IMG OID639836825 
Producthypothetical protein 
Protein accessionYP_984024 
Protein GI121606695 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.477496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCATT CACTCACCGC CCCGCACTTT TCATTGAAGC CTTCCACTCA CTCCAGGGTC 
GTCAAGCCCT GGCTGGCCGG GCTTTCCATG GCGCTTCTGA GCGCCGCTTC CGGCCAGGCG
CTGGCGCAGG ACTGGCCCAC CAAAAACATC ACCATCGTGG TGCCCACGGC CGCCGGCGGC
GCCAATGACG CCATGGCGCG CATCATTGGA CAGGGCCTGA GCGCACGCCT CGGGAAAGGG
GTCATTGTTG AAAACAAGGC TGGTGCCAAC GGCGCGATTG CCAGCGAGTA TGTGGCCCGC
GCGGCGCCCG ACGGCTACAC CATCATGTTC GGCTACATCG CCACCCACGG CATCAACCCG
GCGCTGCAAA AGCTCAAATA CGACCCGGTC ACCGATTTCG AGCCCATCGG CATGGTGGCG
GCCTCGCCGA CCGTGCTGGT CGTGAACAAC GCCGTAGCCG CCAAAAACGT CAAGGAACTG
GTGCAAGTGA TCAAGGCCAA GCCCGGCACC TTCAATTACG CCTCTGCCGG CAACGGCACC
GCACCGCACA TCGCTGGCGA ACTGTTCAAA TTATCTGCCG GCGTGGATGT GCTGAGCGTT
CCCTACAAAG GCTCGGCCCC GGCCGTGGTG GACACCATTG CCGGCAACAC GCAGTTGATG
TTCCCCAGCC TGTTCACCGC CTACCCCCAT GTCAAGGAAG GCCGGCTCAG GGCGCTGGGC
ATTGCCGGCG AGAAACGCTC GCTCCTGTTG CCCGATGTTC CCACGCTGGC CGAGCAGGGC
GTTGCCAACG TCAACATGTC GCAGTGGTAC GCCATGTTCG CGCCCGCCAG GACGCCCAAG
GCCGTGGTTG AGCGGATCAA CCGCGAAATG AACAGCGTGC TGGCCGACAA GGCCGTGCAG
AAAAAAATCC AGGATCAGGG CGCGGAAGTT GAAACCGGCA CCCCCGAACA ACTCAAGACC
CTGGTGCAAA AAGAAGCGGT CCGCTGGAAA AGCGTCATAG CGGCTGCAAA GATCAAGGCT
GAATAA
 
Protein sequence
MPHSLTAPHF SLKPSTHSRV VKPWLAGLSM ALLSAASGQA LAQDWPTKNI TIVVPTAAGG 
ANDAMARIIG QGLSARLGKG VIVENKAGAN GAIASEYVAR AAPDGYTIMF GYIATHGINP
ALQKLKYDPV TDFEPIGMVA ASPTVLVVNN AVAAKNVKEL VQVIKAKPGT FNYASAGNGT
APHIAGELFK LSAGVDVLSV PYKGSAPAVV DTIAGNTQLM FPSLFTAYPH VKEGRLRALG
IAGEKRSLLL PDVPTLAEQG VANVNMSQWY AMFAPARTPK AVVERINREM NSVLADKAVQ
KKIQDQGAEV ETGTPEQLKT LVQKEAVRWK SVIAAAKIKA E