Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3807 |
Symbol | |
ID | 4686783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4059845 |
End bp | 4060870 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639836825 |
Product | hypothetical protein |
Protein accession | YP_984024 |
Protein GI | 121606695 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.477496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCATT CACTCACCGC CCCGCACTTT TCATTGAAGC CTTCCACTCA CTCCAGGGTC GTCAAGCCCT GGCTGGCCGG GCTTTCCATG GCGCTTCTGA GCGCCGCTTC CGGCCAGGCG CTGGCGCAGG ACTGGCCCAC CAAAAACATC ACCATCGTGG TGCCCACGGC CGCCGGCGGC GCCAATGACG CCATGGCGCG CATCATTGGA CAGGGCCTGA GCGCACGCCT CGGGAAAGGG GTCATTGTTG AAAACAAGGC TGGTGCCAAC GGCGCGATTG CCAGCGAGTA TGTGGCCCGC GCGGCGCCCG ACGGCTACAC CATCATGTTC GGCTACATCG CCACCCACGG CATCAACCCG GCGCTGCAAA AGCTCAAATA CGACCCGGTC ACCGATTTCG AGCCCATCGG CATGGTGGCG GCCTCGCCGA CCGTGCTGGT CGTGAACAAC GCCGTAGCCG CCAAAAACGT CAAGGAACTG GTGCAAGTGA TCAAGGCCAA GCCCGGCACC TTCAATTACG CCTCTGCCGG CAACGGCACC GCACCGCACA TCGCTGGCGA ACTGTTCAAA TTATCTGCCG GCGTGGATGT GCTGAGCGTT CCCTACAAAG GCTCGGCCCC GGCCGTGGTG GACACCATTG CCGGCAACAC GCAGTTGATG TTCCCCAGCC TGTTCACCGC CTACCCCCAT GTCAAGGAAG GCCGGCTCAG GGCGCTGGGC ATTGCCGGCG AGAAACGCTC GCTCCTGTTG CCCGATGTTC CCACGCTGGC CGAGCAGGGC GTTGCCAACG TCAACATGTC GCAGTGGTAC GCCATGTTCG CGCCCGCCAG GACGCCCAAG GCCGTGGTTG AGCGGATCAA CCGCGAAATG AACAGCGTGC TGGCCGACAA GGCCGTGCAG AAAAAAATCC AGGATCAGGG CGCGGAAGTT GAAACCGGCA CCCCCGAACA ACTCAAGACC CTGGTGCAAA AAGAAGCGGT CCGCTGGAAA AGCGTCATAG CGGCTGCAAA GATCAAGGCT GAATAA
|
Protein sequence | MPHSLTAPHF SLKPSTHSRV VKPWLAGLSM ALLSAASGQA LAQDWPTKNI TIVVPTAAGG ANDAMARIIG QGLSARLGKG VIVENKAGAN GAIASEYVAR AAPDGYTIMF GYIATHGINP ALQKLKYDPV TDFEPIGMVA ASPTVLVVNN AVAAKNVKEL VQVIKAKPGT FNYASAGNGT APHIAGELFK LSAGVDVLSV PYKGSAPAVV DTIAGNTQLM FPSLFTAYPH VKEGRLRALG IAGEKRSLLL PDVPTLAEQG VANVNMSQWY AMFAPARTPK AVVERINREM NSVLADKAVQ KKIQDQGAEV ETGTPEQLKT LVQKEAVRWK SVIAAAKIKA E
|
| |