| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3788 |
|---|
| Symbol | |
|---|
| ID | 4686084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 4040697 |
|---|
| End bp | 4041410 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639836806 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_984005 |
|---|
| Protein GI | 121606676 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGC TGGCCCTCCT CACGCAAGGC GGCCTTGTCA GTCAACTGGT CGCGGGGCTG
TTGCTGTCCA TGTCGGTGGC CAGCTGGGTC GTTATTTTGT GGAAAACCTG GCTGCTGCAC
CGCGCCGTGG GCGATGTGGC GCGCAGCACG GCCGCTTTCT GGCAGTCAGC CTCGGTGGAC
GCCGCCTGCG AGAAGGTGGC GGCATTCGAC CGCGATGCCC TGGTGCTGCC GCTGATCGCT
GCAACGCAAA CCCGAGCGCA CGGAACGCTG GCCACGGCGG GCGACAAGGC GGCGCAACTC
ACGCGCGTGC TGCGCGACGC CCTGCATGCC ATTCTGCAAA AACTGCAGTT TGGCCAGATC
TTGCTGGCCA CGGTCGGCTC CACGGCGCCT TTTGTCGGGC TGCTGGGAAC GGTCTGGGGC
ATTTACCACG CGCTGACCGG CATGGCGACG GCGGGGCAAG TCACCATCGA CAAGGTGTCC
GGCCCGGTGG GCGAGGCGCT CATCATGACA GCCGCCGGCC TGGCGGTGGC GATTCCGGCC
GTTCTGGCCT ACAACGTGTT TGGCCGCAGC ATTGGACGCA TCGAAGCCGA CCTGGAAGGA
TTTGCATTCG ATTTGCGGGA ACTGCTGGCG GCTGACGCCA ACGCCAAGGT CGTTACCGAA
CGCAGCGCTG GGCCGCCCCG GGCAAGTGAA GCCCTTTCGG AGGTCATTGA GTGA
|
|---|
| Protein sequence | MSLLALLTQG GLVSQLVAGL LLSMSVASWV VILWKTWLLH RAVGDVARST AAFWQSASVD
AACEKVAAFD RDALVLPLIA ATQTRAHGTL ATAGDKAAQL TRVLRDALHA ILQKLQFGQI
LLATVGSTAP FVGLLGTVWG IYHALTGMAT AGQVTIDKVS GPVGEALIMT AAGLAVAIPA
VLAYNVFGRS IGRIEADLEG FAFDLRELLA ADANAKVVTE RSAGPPRASE ALSEVIE
|
|---|
| |