Gene Pnap_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3754 
Symbol 
ID4689404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4001219 
End bp4001881 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID639836772 
Productnitroreductase 
Protein accessionYP_983971 
Protein GI121606642 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.913341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.820114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTG CTGCCTCGCC CCTTGAGCCC GCCGCGCCGC TTCACCATGC CCTGGCCGAG 
GGCGACCTGC CGTCGATGGC CGCCTTGCTC ATGCAGTCGC GACAGACCAT CCTGCCCAGG
CGGCTGGGCG GGGCCGGCCC CACCCGGCCG GAACTGGAGG CGATCCTGAA CGCCGCGTCC
GCCGCGCCCG ACCATGGGCA ACTGCTGCCC TGGCGCTTCG TGCTGGTGCC GCAGAATGCG
CGCGGGCTGC TTGCCGATGT CTTTGGCGAA GCGCTGCTGG AGCGCGACAG CGCCGCCACG
CCCGAGCAGG TGGCGCAGGC GCAGGAAAAA GCCCACCGTG CGCCGTTGCT CATGCTGGTG
GTGGTCGATG GCCGCCGGGG CGACCTGAAG ATAGACCTGT TCGAGCGCAT GATATCGGCC
GGCTGCGCGC TGCAAAACAT GCTGCTCATG GCCACCGCCA TGGGGTACGG CTCGGCGCTG
ACCAGCGGCA AGGCGCTCAA GTCGGGCGGC CTGCGCGCGC TGTTTGGCCT GGTCGAGGGC
GAGCATGCGC TGTGCTTTGT CAGCATGGGC ACGGCGCAGT CGCGCAAGCC CCCGCATGCG
CGGCCTTCGC CCGGCGATTA CGTCAGCATC CTGTCGCCCG ATGGCGGCAC GACAGTTTTT
TAG
 
Protein sequence
MTFAASPLEP AAPLHHALAE GDLPSMAALL MQSRQTILPR RLGGAGPTRP ELEAILNAAS 
AAPDHGQLLP WRFVLVPQNA RGLLADVFGE ALLERDSAAT PEQVAQAQEK AHRAPLLMLV
VVDGRRGDLK IDLFERMISA GCALQNMLLM ATAMGYGSAL TSGKALKSGG LRALFGLVEG
EHALCFVSMG TAQSRKPPHA RPSPGDYVSI LSPDGGTTVF