Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3754 |
Symbol | |
ID | 4689404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4001219 |
End bp | 4001881 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639836772 |
Product | nitroreductase |
Protein accession | YP_983971 |
Protein GI | 121606642 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.913341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.820114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTTG CTGCCTCGCC CCTTGAGCCC GCCGCGCCGC TTCACCATGC CCTGGCCGAG GGCGACCTGC CGTCGATGGC CGCCTTGCTC ATGCAGTCGC GACAGACCAT CCTGCCCAGG CGGCTGGGCG GGGCCGGCCC CACCCGGCCG GAACTGGAGG CGATCCTGAA CGCCGCGTCC GCCGCGCCCG ACCATGGGCA ACTGCTGCCC TGGCGCTTCG TGCTGGTGCC GCAGAATGCG CGCGGGCTGC TTGCCGATGT CTTTGGCGAA GCGCTGCTGG AGCGCGACAG CGCCGCCACG CCCGAGCAGG TGGCGCAGGC GCAGGAAAAA GCCCACCGTG CGCCGTTGCT CATGCTGGTG GTGGTCGATG GCCGCCGGGG CGACCTGAAG ATAGACCTGT TCGAGCGCAT GATATCGGCC GGCTGCGCGC TGCAAAACAT GCTGCTCATG GCCACCGCCA TGGGGTACGG CTCGGCGCTG ACCAGCGGCA AGGCGCTCAA GTCGGGCGGC CTGCGCGCGC TGTTTGGCCT GGTCGAGGGC GAGCATGCGC TGTGCTTTGT CAGCATGGGC ACGGCGCAGT CGCGCAAGCC CCCGCATGCG CGGCCTTCGC CCGGCGATTA CGTCAGCATC CTGTCGCCCG ATGGCGGCAC GACAGTTTTT TAG
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Protein sequence | MTFAASPLEP AAPLHHALAE GDLPSMAALL MQSRQTILPR RLGGAGPTRP ELEAILNAAS AAPDHGQLLP WRFVLVPQNA RGLLADVFGE ALLERDSAAT PEQVAQAQEK AHRAPLLMLV VVDGRRGDLK IDLFERMISA GCALQNMLLM ATAMGYGSAL TSGKALKSGG LRALFGLVEG EHALCFVSMG TAQSRKPPHA RPSPGDYVSI LSPDGGTTVF
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