| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3750 |
|---|
| Symbol | |
|---|
| ID | 4688150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3997270 |
|---|
| End bp | 3998565 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639836768 |
|---|
| Product | glutamate--cysteine ligase |
|---|
| Protein accession | YP_983967 |
|---|
| Protein GI | 121606638 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02049] glutamate--cysteine ligase, T. ferrooxidans family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.832044 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCCGC ACCTCATTAC TGCCCTGACC GGCCCCATCA ACGAGCTTGA ACAGCGTATC
CTGGACACCA CGCCGGCCAT CGAGCGCTGG TTCCGGCTCG AATGGATGGA GCACACGCCG
CCTTTCTACA GCTCGGTGGA CATCCGCAAT GCCGGCTTCA AGCTCGCGCC TGTCGATACC
AACCTGTTTC CGGGCGGCTG GAACAACCTG ACGCCGCAGA TGATGCCGCT GGCGGTGCAG
GCGGCCATGG CGGCGATTGA AAAGATTTGC CCCGAGGCGC GCAACCTGCT GGTGGTGCCC
GAACACCACA CCCGCAACCC GTTTTACCTT GCCAATGTGG TGCAGCTCAA GCGCATTTTT
CACCAGGCCG GCCTGAACGT GCGTTTTGGC TCGCTGAGCG CCGACATCAA GGAGCCGACC
ATGATGCAGC TGCCGGGCGG TGAGAGCCTG GTGATCGAGC CCCTGATCCG CACCGACCGC
CGCCTGGGGC TCAAGGACTT CGACCCCTGC ACCATTTTGC TCAACAACGA CCTGTCGGCC
GGCATTCCCG GCATTCTGGA AGACCTGCAC GAGCAGCACC TGCTGCCGCC GCTGCACGCG
GGCTGGACGG TGCGCCGAAA ATCCAACCAT TTCAAGGCCT ACGAAGAGAT TTCGAAGCGC
TTTGGCAAGC TGCTCGGCAT TGACCCGTGG CTGATCAATC CGCTGTTTGC CCAGTGCGAC
GACATCAATT TCCCGGAAGG CCGGGGCATG GAATGCTTGA GCACGCATGT CGATGCGCTG
CTGTCGCGAA TCCGGCGCAA GTACAAGGAA TACGGCATCA ACGAAAAGCC CTTCGTCATG
GTCAAGCCCG ACAACGGCAC CTACGGCATG GGCGTCATGA CGGTGCATGA CGCCAAGGAG
CTGGACACGC TCAGCCGCAA GACCAAAAAC AAGATGAGCA CGACCAAGGA CGGCCAGCCG
CTGACTGAAA TCATCATTCA GGAAGGCGTG CTGACCAACG AGCGCATCGG GGGCGCCGTG
GCCGAGCCGG TGGTGTACAT GATGGACCGC TATGTGGTCG GCGGCTTTTA CCGCGTGCAT
GCCGAGCGCG GCGTCGATGA AAACCTGAAC GCGCCCGGGG CCAGCTTCGA GCCGCTGGCC
TTTTCAGACA GCGGGCGCCT GCCGCAGAAG GGTGAAATCC CCGGCTCCAG CGGCCCGAAC
CGCTTTTACA TGTACGGCGT CGTCGCCCGG CTGGCCATGC TGGCGGCCAG CTACGAGCTT
GAAGCGACCG ATCCGGATGC CGAGGTGTAC GACTAG
|
|---|
| Protein sequence | MVPHLITALT GPINELEQRI LDTTPAIERW FRLEWMEHTP PFYSSVDIRN AGFKLAPVDT
NLFPGGWNNL TPQMMPLAVQ AAMAAIEKIC PEARNLLVVP EHHTRNPFYL ANVVQLKRIF
HQAGLNVRFG SLSADIKEPT MMQLPGGESL VIEPLIRTDR RLGLKDFDPC TILLNNDLSA
GIPGILEDLH EQHLLPPLHA GWTVRRKSNH FKAYEEISKR FGKLLGIDPW LINPLFAQCD
DINFPEGRGM ECLSTHVDAL LSRIRRKYKE YGINEKPFVM VKPDNGTYGM GVMTVHDAKE
LDTLSRKTKN KMSTTKDGQP LTEIIIQEGV LTNERIGGAV AEPVVYMMDR YVVGGFYRVH
AERGVDENLN APGASFEPLA FSDSGRLPQK GEIPGSSGPN RFYMYGVVAR LAMLAASYEL
EATDPDAEVY D
|
|---|
| |