| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3735 |
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| Symbol | |
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| ID | 4686771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3977368 |
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| End bp | 3978606 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836753 |
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| Product | hypothetical protein |
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| Protein accession | YP_983952 |
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| Protein GI | 121606623 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2342] Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.756384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0338258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCC ACACACCTAC TTACACTCCC CTCCATGGCC ATCGCACAGG CTCCCGCCTG
GCCACCACGA TGCGCTGCAC CACCTTGCTC GTTGCGATGG CAGGCGCCTT CACGGCCCAT
GGCCGCACCC TGACCGTCAT TGGCGACACG CAGCCCGCAG GCAGCACCTG GCAAGACAGT
TCCGCCACGG AATCCAGCTC CACCAGGACG TGGCAACGGA GAAAACACAC AAACACACAA
ACGCCAACAA CGCCGACTCC AACGCCAACG CCTACGCCTA CGCCTACGCC TACGCCTACG
CCTACGCCTA CGCCTACGCC TACGCCTACG CCTACGCCTA CGCCCACCCC AACGCCCCCA
GCAACGACTT CCAGCCGAGG CTTCCCCACC GCCGGTCCGT GGGCGTCCTT CTATGGGTCG
GCGGACAGCA TCGATCTGCC CAAATTGGCG GCGACGTACC GCATCCTGGA CATTGACGCC
GACCCGGACA TGGGCAACTT CAGCGTCAGC CAGATCAAGA CGCTCAAGAA CGGCGGCGCC
AACAAGGTGT TGAGCTACCT GAACCTGGGC TCGTGCGAAA ACTTCCGTGG CTACTGGTCA
AAGGTGCCGT CGGGATTCCT CTCATGCTCG GCCAACAAGG CGGCGCAATT GGGTACCTAC
TCGGGTTACA GCAACGAGGT CTGGATGAAT GTCGGCAATG CCGCTTACCA AAACCTGGTC
ATCAACTACA TCGTGCCCCG GCTCGCCGCC CAGGGCGTGG ACGGTTTTTA CTTCGACAAC
ATGGAAATCG TCGAGCACGG AACGAACACC AAGAACGGCC CCTGCGACGC CCAGTGCAGC
CAGGGCGGCC TCGACCTGAT TGCCAAGCTG CGCGACAAGT ACCCTTCGAT GCTCTTCGTG
CTGCAGAACG CGACCAGCGA CAAGACGCGC CTCGGCCGGG CAACGGGCGC ATCCGGCACA
GTCGCCTTCC CGAGCCTGCT CGACGGCATC GCGCACGAAG AGGTGTACAA GCCCGTCCAT
GACACGTCCG TCGAAGCCGA ACTGGTCAGC TGGTCGGGCA TGAACCTGAT GCCGGGCGGC
CGCAAGTTCT GGATCGGAAC GCTGGACTAC GCCAGCAGCT GCACCAACAC CAGCGCAGCC
CAGTCGGCCT TCCAGTCCAG CCGTGCGCGC GGCTTCTCGC CTTCAGTCTC CGACTCCAGC
GCGGGACAGC AGACCGTGTG TTACTGGCCT GCTTTTTAA
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| Protein sequence | MSTHTPTYTP LHGHRTGSRL ATTMRCTTLL VAMAGAFTAH GRTLTVIGDT QPAGSTWQDS
SATESSSTRT WQRRKHTNTQ TPTTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPP
ATTSSRGFPT AGPWASFYGS ADSIDLPKLA ATYRILDIDA DPDMGNFSVS QIKTLKNGGA
NKVLSYLNLG SCENFRGYWS KVPSGFLSCS ANKAAQLGTY SGYSNEVWMN VGNAAYQNLV
INYIVPRLAA QGVDGFYFDN MEIVEHGTNT KNGPCDAQCS QGGLDLIAKL RDKYPSMLFV
LQNATSDKTR LGRATGASGT VAFPSLLDGI AHEEVYKPVH DTSVEAELVS WSGMNLMPGG
RKFWIGTLDY ASSCTNTSAA QSAFQSSRAR GFSPSVSDSS AGQQTVCYWP AF
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