Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3691 |
Symbol | |
ID | 4686228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3930293 |
End bp | 3931174 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639836709 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_983908 |
Protein GI | 121606579 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.778407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA ATTTTGAAAC ATGGCTGCCC AAACTGGTCA TTTCACCGGC CTTCGTGCTG GGGTTTGCCT TTATTTACGG CTTCATGGTG TGGAACGGCG TGCTGTCCGT CACCGGCTCG CGCATGCTGC CCAACTATGA CGAATTCGTC GGGCTGGCGC AGTATGAGCG GCTGTTCGAG ATGGACCGCT GGTGGGTGGC GCTGAAAAAC CTCGGGATTT TCAGCCTGCT CTACGTCGGC GGCTCGATGC TGATCGGCAT GGTGCTGGCG ATTTTCCTGG ACCAGAAGGT GCGCGGCGAG GGCGCCCTGC GCATCATCTA CCTGTACCCG ATGGCGCTGT CGTTCATCGT CACCGGTACC GCCTGGAAAT GGATTCTGAA CCCCAGCCTC GGGCTGGAAA AGCTCATGCA CGACCTGGGC TGGGCCAGTT TTCATTTCGA CTGGCTGGTG CAGAGCGACT TCGCCATTTA CTGCGTGGTG ATTGCCGGCA TCTGGCAGTC GGCCGGCTTC GCCATGGCCT TGTTTTTGGC GGGCCTGCGC GGCATTGACG ACAGCATCAT CAAGGCCGCG CAGATCGACG GCGCCTCGCT GCCGCGCATT TACTGGCGCA TTCTTTTGCC CATCCTGCGC CCGGTCGTGT TCTCCACCAT CTTGGTGCTG GCGCACCTGT CGATCAAGAG TTTCGACCTG GTGATGGCGC TGACCAACGG CGGCCCCGGG TATGCGACCG ACGTGCCGGC CACCTTCATG TTCGTCATGA GCTTCACCCG TGGCCAGATC GGCCTGGGCG CCGCCAGCGC CACCATGATG CTGGCCACGG TGGCCGCCAT CGTCGTGCCT TATCTTTACA GCGAACTTCG AGCCAAACCC CATGACCGCT AA
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Protein sequence | MKNNFETWLP KLVISPAFVL GFAFIYGFMV WNGVLSVTGS RMLPNYDEFV GLAQYERLFE MDRWWVALKN LGIFSLLYVG GSMLIGMVLA IFLDQKVRGE GALRIIYLYP MALSFIVTGT AWKWILNPSL GLEKLMHDLG WASFHFDWLV QSDFAIYCVV IAGIWQSAGF AMALFLAGLR GIDDSIIKAA QIDGASLPRI YWRILLPILR PVVFSTILVL AHLSIKSFDL VMALTNGGPG YATDVPATFM FVMSFTRGQI GLGAASATMM LATVAAIVVP YLYSELRAKP HDR
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