| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3680 |
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| Symbol | |
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| ID | 4689721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3915375 |
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| End bp | 3917612 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836698 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_983897 |
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| Protein GI | 121606568 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.465452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCG GAAAATCAAA AATCATCTAC ACGCTCACCG ACGAGGCGCC GCTGCTGGCG
ACCTGGTCGT TTCTGCCCGT CGTGCGCGCC TTCACCGCGC CGGCCGGCAT TGAAGTCGCC
GAGAGCGACA TCTCGGTCGC GGCCCGGGTG CTGGCCGAAT TTCCCGAGTT CCTGAGCGAC
GCGCAGAAGG TTCCCAACAC GCTGGCCGAA CTCGGCCGCC TGACGCAGGA TCCCGACACC
AACATCATCA AGCTGCCCAA CATCAGCGCT TCGCAGGGGC AACTGGTCAG CGCCATCAAG
GAACTGCAGT CCAAGGGTTT CAACCTTCCG GACTACCCCG AAAGCCCCAA GAGCGACGAG
GACAAGGCGA TTCGCGCGCG CTATGCCCGC TGCATCGGCA GCTCCGTCAA CCCGGTGCTG
CGCGAAGGCA ACTCCGACCG CCGCGCCCCG CTGGCCGTGA AGAACTACGC GCGCAAGAAT
CCGCATTCGA TGGCCGACTG GAGCCAGGCG TCGCGCTCGC ACGTCTCGCA CATGCACCAC
GGCGACTTCT ACCACGGCGA AAAGTCGATG ACGCTGGACA AGGCGCGCGA CGTCAAGATG
GAACTGATCA CGAAAAGCGG CAAGACCATC GTGCTCAAAC CCCTGACCAA GCTGCTGGAC
CGCGAGGTCA TCGACAGCAT GTTCATGAGC AAGAAGGAAC TGCTGGACTT CTACGAGCAG
GAAATCGACG ACGCCTACAA GACCGGCGTG ATGTTCTCGC TGCACGTCAA GGCCACGATG
ATGAAGGTCT CGCACCCCAT CGTGTTCGGT CACTGCGTGA AAATCTTTTA CAAGGACGCC
TTCGAGAAGC ACGCCAAGCT GTTCGACGAG CTGGGCGTGA ACGTCAACAA CGGCATGGCC
AACCTGTACG ACAAGATTTC CACCCTGCCG CAGAGCACGC AGGACGAGAT CAAGCGCGAC
CTGCACGCCT GCCACGAGCA CCGCCCCGAG CTGGCCATGG TGGACTCGGC CAAGGGCATC
ACCAACTTCC ATTCGCCCAA CGACGTGATC GTCGATGCCT CCATGCCCGC GATGATCAGG
AACGGCGGCA AGATGTGGGG CGCCGACGGC CGCCTGAAGG ACGTCAAGGC CGTGATGCCC
GAATCGACCT TTGCCCGCAT CTACCAGGAG ATCATCAACT TCTGCAAGTG GCATGGTGCC
TTCGATCCCA AGACCATGGG CACCGTGCCC AACGTGGGCC TGATGGCCCA GCAGGCCGAG
GAATACGGCT CGCATGACAA GACCTTCGAG ATCAGCGAAG ACGGCGTCGC CAACATCACT
GACGTTGCTA CTGGCGAAGT GCTGCTGAGC CAGAACGTGG AAGCTGGCGA CATCTGGCGC
ATGTGCCAGT GCAAGGACGC CGCCATCCGC GACTGGGTGA AGCTGGCAGT GAACCGTGCC
CGCAACTCCG GCATGCCGGT GGTGTTCTGG CTCGACGCCT ACCGTCCGCA CGAGGCCCAG
CTGATCACCA AGGTCAAGAT GTACCTGCAC GAGCACAACA CCAGCGGGCT GGACATCCAG
ATCATGAGCC AGGTGCGCGC CATGCGCTAC ACGCTGGAGC GCGTGGTGCG CGGCCAGGAC
ACCATCAGCG CCACCGGCAA CATCCTGCGC GACTACCTGA CCGACCTGTT CCCGATCATG
GAGCTGGGCA CCAGCGCCAA GATGCTGTCC ATCGTGCCCC TGATGGCCGG CGGCGGCATG
TACGAAACCG GCGCCGGCGG CTCGGCGCCC AAGCATGTGC AGCAACTGGT CGAGGAAAAC
CACCTGCGCT GGGACTCGCT GGGCGAGTTC CTGGCGCTGG CCGTGTCGCT CGAAGATTTA
GGCATCAAGA CCGGCAACGA CCAGGCCAAG CTGCTGGCCA AAACGCTGGA CGCCGCTACC
GGCAAGCTGC TGGACAACAA CAAGGGCCCC AAGACCCGCA CCGGCGAGCT GGACAACCGG
GGCAGCCATT TCTACCTGGC GATGTACTGG GCGCAGGCCC TGGCCGAGCA GACGCAAGAC
GCGGCGCTGC AGGCACGTTT CGCCCCGCTG GCCAAATCGC TGGCCGAGAA CGAAGCGCAG
ATCGTCGCCG AGTTCAAGGA GGTGCAGGGC AAGCCGGTCG ATATCGGCGG CTACTACCTG
CTGGATGCGG AAAAAGTCAA GGCCGTGATG CGCCCGAGCG CAACCTTCAA TGCGGTGTTG
AGCGCGGCGC AGGCCTAA
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| Protein sequence | MTAGKSKIIY TLTDEAPLLA TWSFLPVVRA FTAPAGIEVA ESDISVAARV LAEFPEFLSD
AQKVPNTLAE LGRLTQDPDT NIIKLPNISA SQGQLVSAIK ELQSKGFNLP DYPESPKSDE
DKAIRARYAR CIGSSVNPVL REGNSDRRAP LAVKNYARKN PHSMADWSQA SRSHVSHMHH
GDFYHGEKSM TLDKARDVKM ELITKSGKTI VLKPLTKLLD REVIDSMFMS KKELLDFYEQ
EIDDAYKTGV MFSLHVKATM MKVSHPIVFG HCVKIFYKDA FEKHAKLFDE LGVNVNNGMA
NLYDKISTLP QSTQDEIKRD LHACHEHRPE LAMVDSAKGI TNFHSPNDVI VDASMPAMIR
NGGKMWGADG RLKDVKAVMP ESTFARIYQE IINFCKWHGA FDPKTMGTVP NVGLMAQQAE
EYGSHDKTFE ISEDGVANIT DVATGEVLLS QNVEAGDIWR MCQCKDAAIR DWVKLAVNRA
RNSGMPVVFW LDAYRPHEAQ LITKVKMYLH EHNTSGLDIQ IMSQVRAMRY TLERVVRGQD
TISATGNILR DYLTDLFPIM ELGTSAKMLS IVPLMAGGGM YETGAGGSAP KHVQQLVEEN
HLRWDSLGEF LALAVSLEDL GIKTGNDQAK LLAKTLDAAT GKLLDNNKGP KTRTGELDNR
GSHFYLAMYW AQALAEQTQD AALQARFAPL AKSLAENEAQ IVAEFKEVQG KPVDIGGYYL
LDAEKVKAVM RPSATFNAVL SAAQA
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